reconnect moved files to git repo

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root
2025-08-01 04:33:03 -04:00
commit 5d3c35492d
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Case,diagnosis,rate,volumne,constrict,const,log_rate,log_volumne
1,constrict,0.825,3.7,1,1.0,-0.19237189264745613,1.308332819650179
2,constrict,1.09,3.5,1,1.0,0.08617769624105241,1.252762968495368
3,constrict,2.5,1.25,1,1.0,0.9162907318741551,0.22314355131420976
4,constrict,1.5,0.75,1,1.0,0.4054651081081644,-0.2876820724517809
5,constrict,3.2,0.8,1,1.0,1.1631508098056809,-0.2231435513142097
6,constrict,3.5,0.7,1,1.0,1.252762968495368,-0.35667494393873245
7,no_constrict,0.75,0.6,0,1.0,-0.2876820724517809,-0.5108256237659907
8,no_constrict,1.7,1.1,0,1.0,0.5306282510621704,0.09531017980432493
9,no_constrict,0.75,0.9,0,1.0,-0.2876820724517809,-0.10536051565782628
10,no_constrict,0.45,0.9,0,1.0,-0.7985076962177716,-0.10536051565782628
11,no_constrict,0.57,0.8,0,1.0,-0.5621189181535413,-0.2231435513142097
12,no_constrict,2.75,0.55,0,1.0,1.0116009116784799,-0.5978370007556204
13,no_constrict,3.0,0.6,0,1.0,1.0986122886681098,-0.5108256237659907
14,constrict,2.33,1.4,1,1.0,0.8458682675776092,0.3364722366212129
15,constrict,3.75,0.75,1,1.0,1.3217558399823195,-0.2876820724517809
16,constrict,1.64,2.3,1,1.0,0.494696241836107,0.8329091229351039
17,constrict,1.6,3.2,1,1.0,0.47000362924573563,1.1631508098056809
18,constrict,1.415,0.85,1,1.0,0.34712953109520095,-0.16251892949777494
19,no_constrict,1.06,1.7,0,1.0,0.058268908123975824,0.5306282510621704
20,constrict,1.8,1.8,1,1.0,0.5877866649021191,0.5877866649021191
21,no_constrict,2.0,0.4,0,1.0,0.6931471805599453,-0.916290731874155
22,no_constrict,1.36,0.95,0,1.0,0.3074846997479607,-0.05129329438755058
23,no_constrict,1.35,1.35,0,1.0,0.30010459245033816,0.30010459245033816
24,no_constrict,1.36,1.5,0,1.0,0.3074846997479607,0.4054651081081644
25,constrict,1.78,1.6,1,1.0,0.5766133643039938,0.47000362924573563
26,no_constrict,1.5,0.6,0,1.0,0.4054651081081644,-0.5108256237659907
27,constrict,1.5,1.8,1,1.0,0.4054651081081644,0.5877866649021191
28,no_constrict,1.9,0.95,0,1.0,0.6418538861723947,-0.05129329438755058
29,constrict,0.95,1.9,1,1.0,-0.05129329438755058,0.6418538861723947
30,no_constrict,0.4,1.6,0,1.0,-0.916290731874155,0.47000362924573563
31,constrict,0.75,2.7,1,1.0,-0.2876820724517809,0.9932517730102834
32,no_constrict,0.03,2.35,0,1.0,-3.506557897319982,0.8544153281560676
33,no_constrict,1.83,1.1,0,1.0,0.6043159668533296,0.09531017980432493
34,constrict,2.2,1.1,1,1.0,0.7884573603642703,0.09531017980432493
35,constrict,2.0,1.2,1,1.0,0.6931471805599453,0.1823215567939546
36,constrict,3.33,0.8,1,1.0,1.2029723039923526,-0.2231435513142097
37,no_constrict,1.9,0.95,0,1.0,0.6418538861723947,-0.05129329438755058
38,no_constrict,1.9,0.75,0,1.0,0.6418538861723947,-0.2876820724517809
39,constrict,1.625,1.3,1,1.0,0.4855078157817008,0.26236426446749106
1 Case diagnosis rate volumne constrict const log_rate log_volumne
2 1 constrict 0.825 3.7 1 1.0 -0.19237189264745613 1.308332819650179
3 2 constrict 1.09 3.5 1 1.0 0.08617769624105241 1.252762968495368
4 3 constrict 2.5 1.25 1 1.0 0.9162907318741551 0.22314355131420976
5 4 constrict 1.5 0.75 1 1.0 0.4054651081081644 -0.2876820724517809
6 5 constrict 3.2 0.8 1 1.0 1.1631508098056809 -0.2231435513142097
7 6 constrict 3.5 0.7 1 1.0 1.252762968495368 -0.35667494393873245
8 7 no_constrict 0.75 0.6 0 1.0 -0.2876820724517809 -0.5108256237659907
9 8 no_constrict 1.7 1.1 0 1.0 0.5306282510621704 0.09531017980432493
10 9 no_constrict 0.75 0.9 0 1.0 -0.2876820724517809 -0.10536051565782628
11 10 no_constrict 0.45 0.9 0 1.0 -0.7985076962177716 -0.10536051565782628
12 11 no_constrict 0.57 0.8 0 1.0 -0.5621189181535413 -0.2231435513142097
13 12 no_constrict 2.75 0.55 0 1.0 1.0116009116784799 -0.5978370007556204
14 13 no_constrict 3.0 0.6 0 1.0 1.0986122886681098 -0.5108256237659907
15 14 constrict 2.33 1.4 1 1.0 0.8458682675776092 0.3364722366212129
16 15 constrict 3.75 0.75 1 1.0 1.3217558399823195 -0.2876820724517809
17 16 constrict 1.64 2.3 1 1.0 0.494696241836107 0.8329091229351039
18 17 constrict 1.6 3.2 1 1.0 0.47000362924573563 1.1631508098056809
19 18 constrict 1.415 0.85 1 1.0 0.34712953109520095 -0.16251892949777494
20 19 no_constrict 1.06 1.7 0 1.0 0.058268908123975824 0.5306282510621704
21 20 constrict 1.8 1.8 1 1.0 0.5877866649021191 0.5877866649021191
22 21 no_constrict 2.0 0.4 0 1.0 0.6931471805599453 -0.916290731874155
23 22 no_constrict 1.36 0.95 0 1.0 0.3074846997479607 -0.05129329438755058
24 23 no_constrict 1.35 1.35 0 1.0 0.30010459245033816 0.30010459245033816
25 24 no_constrict 1.36 1.5 0 1.0 0.3074846997479607 0.4054651081081644
26 25 constrict 1.78 1.6 1 1.0 0.5766133643039938 0.47000362924573563
27 26 no_constrict 1.5 0.6 0 1.0 0.4054651081081644 -0.5108256237659907
28 27 constrict 1.5 1.8 1 1.0 0.4054651081081644 0.5877866649021191
29 28 no_constrict 1.9 0.95 0 1.0 0.6418538861723947 -0.05129329438755058
30 29 constrict 0.95 1.9 1 1.0 -0.05129329438755058 0.6418538861723947
31 30 no_constrict 0.4 1.6 0 1.0 -0.916290731874155 0.47000362924573563
32 31 constrict 0.75 2.7 1 1.0 -0.2876820724517809 0.9932517730102834
33 32 no_constrict 0.03 2.35 0 1.0 -3.506557897319982 0.8544153281560676
34 33 no_constrict 1.83 1.1 0 1.0 0.6043159668533296 0.09531017980432493
35 34 constrict 2.2 1.1 1 1.0 0.7884573603642703 0.09531017980432493
36 35 constrict 2.0 1.2 1 1.0 0.6931471805599453 0.1823215567939546
37 36 constrict 3.33 0.8 1 1.0 1.2029723039923526 -0.2231435513142097
38 37 no_constrict 1.9 0.95 0 1.0 0.6418538861723947 -0.05129329438755058
39 38 no_constrict 1.9 0.75 0 1.0 0.6418538861723947 -0.2876820724517809
40 39 constrict 1.625 1.3 1 1.0 0.4855078157817008 0.26236426446749106

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"homog_stat","homog_df","homog_binom_p","homog_cont_p","lbl_stat","lbl_expval","lbl_var","lbl_chi2","lbl_pvalue","lbl2_stat","lbl2_expval","lbl2_var","lbl2_chi2","lbl2_pvalue","bowker_stat","bowker_df","bowker_pvalue"
0.470588235294118,1,0.60759136127308,0.606905427217951,215,210.136363636364,5.44848959817612,4.34156260215759,0.0371927738063454,369,354.409090909091,49.0364063835851,4.34156260215755,0.0371927738063464,0.470588235294118,1,0.492716677227088
271.922246968262,3,0,0,1760,1637.12,318.387012391739,47.4249696511547,5.71498404156046e-12,6006,5384.96,8083.23776042639,47.7148752803301,4.9293902293357e-12,297.610989010989,6,2.65851858368065e-61
13.7647058823529,2,0,0,661,608.890625,45.1014721487451,60.2061714068945,8.54871728961371e-15,1761,1544.046875,804.735991710752,58.4895654377337,2.04281036531029e-14,13.7692307692308,3,0.00323670650323545
1 homog_stat homog_df homog_binom_p homog_cont_p lbl_stat lbl_expval lbl_var lbl_chi2 lbl_pvalue lbl2_stat lbl2_expval lbl2_var lbl2_chi2 lbl2_pvalue bowker_stat bowker_df bowker_pvalue
2 0.470588235294118 1 0.60759136127308 0.606905427217951 215 210.136363636364 5.44848959817612 4.34156260215759 0.0371927738063454 369 354.409090909091 49.0364063835851 4.34156260215755 0.0371927738063464 0.470588235294118 1 0.492716677227088
3 271.922246968262 3 0 0 1760 1637.12 318.387012391739 47.4249696511547 5.71498404156046e-12 6006 5384.96 8083.23776042639 47.7148752803301 4.9293902293357e-12 297.610989010989 6 2.65851858368065e-61
4 13.7647058823529 2 0 0 661 608.890625 45.1014721487451 60.2061714068945 8.54871728961371e-15 1761 1544.046875 804.735991710752 58.4895654377337 2.04281036531029e-14 13.7692307692308 3 0.00323670650323545

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Days Duration Weight ID
0.0 1 1 1
2.0 1 1 2
1.0 1 1 3
3.0 1 1 4
0.0 1 1 5
2.0 1 1 6
0.0 1 1 7
5.0 1 1 8
6.0 1 1 9
8.0 1 1 10
2.0 1 2 1
4.0 1 2 2
7.0 1 2 3
12.0 1 2 4
15.0 1 2 5
4.0 1 2 6
3.0 1 2 7
1.0 1 2 8
5.0 1 2 9
20.0 1 2 10
15.0 1 3 1
10.0 1 3 2
8.0 1 3 3
5.0 1 3 4
25.0 1 3 5
16.0 1 3 6
7.0 1 3 7
30.0 1 3 8
3.0 1 3 9
27.0 1 3 10
0.0 2 1 1
1.0 2 1 2
1.0 2 1 3
0.0 2 1 4
4.0 2 1 5
2.0 2 1 6
7.0 2 1 7
4.0 2 1 8
0.0 2 1 9
3.0 2 1 10
5.0 2 2 1
3.0 2 2 2
2.0 2 2 3
0.0 2 2 4
1.0 2 2 5
1.0 2 2 6
3.0 2 2 7
6.0 2 2 8
7.0 2 2 9
9.0 2 2 10
10.0 2 3 1
8.0 2 3 2
12.0 2 3 3
3.0 2 3 4
7.0 2 3 5
15.0 2 3 6
4.0 2 3 7
9.0 2 3 8
6.0 2 3 9
1.0 2 3 10

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"","cond","anx","age","educ","gender","income","emo","p_harm","tone","eth","treat","english","immigr","anti_info","cong_mesg"
"1","3","a little anxious",45,"high school","male",13,7,6,0,1,0,"Oppose",4,0,1
"2","4","somewhat anxious",73,"bachelor's degree or higher","male",16,6,3,0,0,0,"Favor",3,0,0
"3","2","a little anxious",53,"some college","female",3,8,7,1,0,0,"Strongly Oppose",3,0,0
"4","1","not anxious at all",45,"high school","male",14,9,8,1,1,1,"Strongly Oppose",4,0,1
"5","3","somewhat anxious",55,"some college","female",12,5,5,0,1,0,"Strongly Oppose",2,0,0
"6","1","a little anxious",85,"high school","female",3,5,6,1,1,1,"Strongly Oppose",4,0,0
"7","1","a little anxious",58,"high school","female",10,10,8,1,1,1,"Oppose",4,0,0
"8","2","a little anxious",53,"some college","male",9,8,7,1,0,0,"Favor",4,1,1
"9","1","a little anxious",52,"some college","female",14,8,5,1,1,1,"Strongly Oppose",3,0,0
"10","4","very anxious",42,"some college","male",15,3,2,0,0,0,"Oppose",2,0,0
"11","4","a little anxious",38,"bachelor's degree or higher","female",9,11,8,0,0,0,"Strongly Oppose",4,1,1
"12","4","very anxious",38,"high school","male",6,9,8,0,0,0,"Strongly Oppose",4,1,1
"13","4","a little anxious",26,"bachelor's degree or higher","female",10,8,6,0,0,0,"Oppose",3,0,1
"14","1","not anxious at all",52,"some college","male",11,10,8,1,1,1,"Strongly Oppose",4,0,1
"15","1","very anxious",48,"some college","male",19,3,3,1,1,1,"Oppose",2,0,0
"16","2","not anxious at all",62,"high school","female",10,12,8,1,0,0,"Strongly Oppose",4,1,1
"17","1","not anxious at all",41,"less than high school","female",7,9,8,1,1,1,"Oppose",4,0,0
"18","3","somewhat anxious",54,"high school","male",11,6,6,0,1,0,"Strongly Oppose",4,0,0
"19","1","a little anxious",69,"high school","female",9,8,7,1,1,1,"Strongly Oppose",4,0,0
"20","1","somewhat anxious",71,"less than high school","male",6,6,6,1,1,1,"Strongly Oppose",1,0,0
"21","3","somewhat anxious",62,"some college","male",14,4,5,0,1,0,"Oppose",2,0,0
"22","2","very anxious",41,"some college","male",13,3,6,1,0,0,"Strongly Oppose",3,0,0
"23","3","a little anxious",60,"high school","female",11,7,7,0,1,0,"Strongly Oppose",4,0,1
"24","4","somewhat anxious",62,"some college","male",17,6,8,0,0,0,"Oppose",4,0,1
"25","4","somewhat anxious",31,"bachelor's degree or higher","male",13,7,5,0,0,0,"Strongly Oppose",4,0,0
"26","3","somewhat anxious",50,"some college","female",13,4,2,0,1,0,"Strongly Oppose",2,0,0
"27","3","a little anxious",48,"high school","male",7,9,5,0,1,0,"Strongly Oppose",4,0,1
"28","2","somewhat anxious",29,"some college","male",10,6,4,1,0,0,"Strongly Favor",2,0,0
"29","3","a little anxious",64,"high school","female",5,9,5,0,1,0,"Oppose",4,0,0
"30","3","very anxious",65,"high school","female",12,4,6,0,1,0,"Strongly Oppose",4,0,1
"31","4","not anxious at all",66,"less than high school","female",4,12,8,0,0,0,"Oppose",4,0,0
"32","1","not anxious at all",68,"high school","female",9,11,8,1,1,1,"Strongly Oppose",4,0,1
"33","4","somewhat anxious",43,"high school","female",15,6,6,0,0,0,"Favor",3,0,0
"34","3","a little anxious",57,"bachelor's degree or higher","female",12,7,5,0,1,0,"Oppose",3,0,0
"35","3","somewhat anxious",41,"high school","male",11,9,4,0,1,0,"Strongly Oppose",4,0,0
"36","2","somewhat anxious",85,"bachelor's degree or higher","male",13,7,7,1,0,0,"Strongly Oppose",3,0,1
"37","4","a little anxious",70,"bachelor's degree or higher","male",15,8,8,0,0,0,"Strongly Oppose",4,0,1
"38","3","a little anxious",65,"bachelor's degree or higher","male",14,8,6,0,1,0,"Strongly Oppose",4,0,0
"39","2","a little anxious",67,"less than high school","female",11,11,8,1,0,0,"Strongly Oppose",4,1,1
"40","1","a little anxious",68,"some college","female",9,6,5,1,1,1,"Favor",2,0,0
"41","2","somewhat anxious",64,"some college","male",13,5,5,1,0,0,"Strongly Oppose",2,0,0
"42","1","a little anxious",37,"some college","male",13,10,8,1,1,1,"Strongly Oppose",4,0,1
"43","3","not anxious at all",45,"high school","female",7,10,7,0,1,0,"Strongly Oppose",4,0,0
"44","3","a little anxious",81,"less than high school","female",14,9,7,0,1,0,"Oppose",4,0,1
"45","2","somewhat anxious",51,"high school","female",10,6,6,1,0,0,"Strongly Oppose",3,0,0
"46","1","a little anxious",53,"some college","male",12,10,8,1,1,1,"Strongly Oppose",4,0,1
"47","4","somewhat anxious",62,"high school","female",9,6,5,0,0,0,"Strongly Oppose",4,0,0
"48","2","a little anxious",42,"less than high school","male",8,9,8,1,0,0,"Oppose",4,0,1
"49","1","a little anxious",71,"some college","female",12,8,8,1,1,1,"Strongly Oppose",4,0,0
"50","1","a little anxious",56,"high school","male",11,11,8,1,1,1,"Strongly Oppose",4,0,1
"51","1","a little anxious",67,"less than high school","female",8,10,5,1,1,1,"Oppose",4,0,1
"52","4","a little anxious",77,"some college","female",6,7,6,0,0,0,"Strongly Oppose",2,1,0
"53","1","not anxious at all",24,"some college","female",15,11,7,1,1,1,"Strongly Oppose",4,1,1
"54","4","a little anxious",42,"high school","male",3,7,5,0,0,0,"Oppose",2,0,0
"55","3","very anxious",25,"bachelor's degree or higher","female",11,3,4,0,1,0,"Oppose",2,0,0
"56","1","a little anxious",60,"high school","female",12,8,6,1,1,1,"Oppose",4,0,0
"57","1","somewhat anxious",43,"some college","male",14,10,8,1,1,1,"Strongly Oppose",1,0,1
"58","1","a little anxious",60,"some college","male",6,9,6,1,1,1,"Strongly Oppose",3,0,0
"59","4","not anxious at all",31,"high school","male",11,11,7,0,0,0,"Strongly Oppose",4,1,0
"60","2","somewhat anxious",47,"some college","female",13,7,6,1,0,0,"Favor",3,0,0
"61","1","very anxious",32,"bachelor's degree or higher","female",10,3,2,1,1,1,"Favor",2,0,0
"62","2","somewhat anxious",66,"some college","male",8,8,7,1,0,0,"Strongly Oppose",3,0,0
"63","2","very anxious",44,"high school","female",15,6,8,1,0,0,"Strongly Oppose",4,0,0
"64","2","somewhat anxious",46,"high school","male",17,6,4,1,0,0,"Strongly Oppose",3,0,0
"65","4","very anxious",41,"high school","female",10,3,3,0,0,0,"Strongly Oppose",2,0,0
"66","2","a little anxious",75,"high school","female",9,7,4,1,0,0,"Strongly Oppose",3,0,0
"67","1","not anxious at all",53,"bachelor's degree or higher","male",10,12,8,1,1,1,"Strongly Oppose",4,0,1
"68","3","very anxious",60,"bachelor's degree or higher","male",12,3,4,0,1,0,"Favor",2,0,0
"69","3","very anxious",75,"high school","female",2,4,6,0,1,0,"Favor",2,0,0
"70","2","not anxious at all",45,"high school","male",9,12,8,1,0,0,"Strongly Oppose",4,0,0
"71","2","not anxious at all",69,"less than high school","female",5,12,8,1,0,0,"Strongly Oppose",4,0,1
"72","4","somewhat anxious",67,"high school","female",15,6,4,0,0,0,"Strongly Oppose",3,0,0
"73","4","somewhat anxious",20,"high school","male",9,5,5,0,0,0,"Oppose",2,0,0
"74","1","somewhat anxious",43,"bachelor's degree or higher","male",16,6,4,1,1,1,"Strongly Oppose",2,0,0
"75","4","a little anxious",32,"some college","male",10,9,8,0,0,0,"Strongly Oppose",4,0,0
"76","3","somewhat anxious",39,"high school","male",12,5,4,0,1,0,"Favor",3,0,0
"77","3","very anxious",53,"bachelor's degree or higher","female",13,4,3,0,1,0,"Favor",2,0,0
"78","2","not anxious at all",57,"some college","female",2,12,8,1,0,0,"Strongly Oppose",4,1,0
"79","4","a little anxious",62,"high school","female",7,8,7,0,0,0,"Strongly Oppose",3,1,1
"80","2","a little anxious",69,"high school","female",7,9,8,1,0,0,"Strongly Oppose",4,0,0
"81","2","somewhat anxious",44,"high school","female",13,7,6,1,0,0,"Oppose",4,0,0
"82","1","not anxious at all",57,"high school","male",11,12,8,1,1,1,"Strongly Oppose",4,0,0
"83","4","a little anxious",27,"some college","female",15,7,4,0,0,0,"Strongly Oppose",2,0,0
"84","3","somewhat anxious",82,"bachelor's degree or higher","female",17,7,5,0,1,0,"Oppose",2,0,0
"85","4","somewhat anxious",84,"high school","male",12,6,6,0,0,0,"Strongly Oppose",3,1,1
"86","3","somewhat anxious",54,"some college","female",13,5,6,0,1,0,"Oppose",2,0,0
"87","2","very anxious",36,"less than high school","male",11,4,6,1,0,0,"Oppose",4,0,0
"88","1","not anxious at all",47,"some college","male",13,12,8,1,1,1,"Strongly Oppose",4,1,1
"89","1","very anxious",28,"bachelor's degree or higher","female",12,3,6,1,1,1,"Strongly Oppose",4,0,0
"90","2","very anxious",42,"high school","female",14,4,8,1,0,0,"Strongly Oppose",4,0,1
"91","3","very anxious",60,"high school","male",6,7,8,0,1,0,"Strongly Oppose",4,0,0
"92","1","very anxious",55,"bachelor's degree or higher","male",15,3,4,1,1,1,"Strongly Oppose",3,0,0
"93","2","a little anxious",55,"high school","female",6,9,7,1,0,0,"Strongly Oppose",4,0,0
"94","4","not anxious at all",61,"some college","male",12,12,8,0,0,0,"Strongly Oppose",4,1,1
"95","3","somewhat anxious",84,"high school","female",11,5,2,0,1,0,"Favor",2,0,0
"96","4","not anxious at all",45,"high school","female",3,10,8,0,0,0,"Oppose",1,0,1
"97","1","a little anxious",67,"some college","male",7,8,8,1,1,1,"Oppose",3,0,0
"98","2","not anxious at all",24,"some college","male",12,11,8,1,0,0,"Strongly Oppose",4,0,0
"99","2","not anxious at all",64,"less than high school","male",11,10,7,1,0,0,"Strongly Oppose",4,1,1
"100","1","a little anxious",72,"high school","female",7,10,3,1,1,1,"Strongly Oppose",4,0,0
"101","2","not anxious at all",40,"high school","female",4,12,8,1,0,0,"Strongly Favor",1,0,1
"102","4","not anxious at all",35,"bachelor's degree or higher","female",11,9,8,0,0,0,"Strongly Oppose",4,1,1
"103","1","not anxious at all",69,"high school","female",8,12,8,1,1,1,"Oppose",4,0,1
"104","1","a little anxious",30,"less than high school","female",6,11,7,1,1,1,"Oppose",4,0,0
"105","2","a little anxious",45,"high school","female",7,8,8,1,0,0,"Strongly Oppose",3,0,0
"106","4","very anxious",35,"some college","male",9,3,4,0,0,0,"Oppose",2,0,0
"107","4","not anxious at all",47,"high school","male",11,10,8,0,0,0,"Oppose",3,1,1
"108","4","a little anxious",53,"some college","male",11,5,4,0,0,0,"Strongly Oppose",2,0,0
"109","3","a little anxious",75,"high school","male",4,9,6,0,1,0,"Oppose",2,0,0
"110","1","somewhat anxious",70,"high school","female",13,8,6,1,1,1,"Favor",3,0,0
"111","1","somewhat anxious",56,"high school","female",8,7,8,1,1,1,"Strongly Oppose",4,0,1
"112","3","a little anxious",70,"less than high school","female",7,8,8,0,1,0,"Strongly Oppose",3,0,0
"113","4","somewhat anxious",35,"bachelor's degree or higher","male",11,4,3,0,0,0,"Strongly Oppose",2,0,0
"114","1","not anxious at all",54,"bachelor's degree or higher","female",11,12,6,1,1,1,"Strongly Oppose",4,0,0
"115","2","somewhat anxious",76,"bachelor's degree or higher","male",12,5,6,1,0,0,"Strongly Oppose",2,0,0
"116","1","a little anxious",65,"high school","female",13,9,6,1,1,1,"Strongly Oppose",4,1,1
"117","2","somewhat anxious",22,"high school","male",12,5,4,1,0,0,"Oppose",2,0,0
"118","3","somewhat anxious",28,"high school","male",13,8,8,0,1,0,"Strongly Oppose",4,0,1
"119","4","very anxious",26,"bachelor's degree or higher","male",11,3,5,0,0,0,"Favor",3,0,0
"120","1","somewhat anxious",67,"high school","male",13,5,6,1,1,1,"Strongly Oppose",4,0,0
"121","4","very anxious",58,"high school","male",13,5,4,0,0,0,"Strongly Oppose",3,0,1
"122","3","somewhat anxious",34,"some college","female",16,6,3,0,1,0,"Strongly Oppose",3,0,0
"123","2","very anxious",29,"bachelor's degree or higher","female",1,5,6,1,0,0,"Oppose",2,0,0
"124","3","a little anxious",61,"less than high school","male",13,10,6,0,1,0,"Oppose",4,0,1
"125","4","not anxious at all",58,"some college","female",6,11,8,0,0,0,"Strongly Oppose",4,0,0
"126","1","very anxious",46,"some college","female",10,5,4,1,1,1,"Oppose",2,0,0
"127","3","not anxious at all",73,"less than high school","female",6,8,6,0,1,0,"Strongly Oppose",4,0,1
"128","4","very anxious",23,"bachelor's degree or higher","male",1,3,3,0,0,0,"Strongly Oppose",1,0,0
"129","3","very anxious",19,"high school","male",15,4,6,0,1,0,"Strongly Oppose",3,0,0
"130","2","somewhat anxious",35,"some college","male",8,4,4,1,0,0,"Strongly Oppose",2,0,0
"131","2","very anxious",29,"bachelor's degree or higher","male",19,4,5,1,0,0,"Strongly Oppose",3,0,0
"132","2","very anxious",53,"bachelor's degree or higher","male",8,3,3,1,0,0,"Strongly Oppose",3,0,0
"133","3","a little anxious",72,"bachelor's degree or higher","male",12,7,6,0,1,0,"Oppose",3,0,1
"134","3","somewhat anxious",36,"bachelor's degree or higher","male",14,5,4,0,1,0,"Favor",1,0,0
"135","1","not anxious at all",26,"less than high school","male",5,11,8,1,1,1,"Strongly Oppose",3,0,0
"136","2","a little anxious",46,"bachelor's degree or higher","female",13,7,8,1,0,0,"Strongly Oppose",4,0,1
"137","3","a little anxious",31,"high school","male",6,9,8,0,1,0,"Strongly Oppose",4,0,0
"138","2","a little anxious",70,"high school","female",1,8,7,1,0,0,"Strongly Oppose",4,0,0
"139","4","a little anxious",65,"bachelor's degree or higher","male",13,7,6,0,0,0,"Strongly Oppose",3,0,1
"140","4","very anxious",69,"less than high school","female",1,4,4,0,0,0,"Oppose",2,0,0
"141","4","very anxious",72,"bachelor's degree or higher","male",11,4,4,0,0,0,"Oppose",2,0,0
"142","1","not anxious at all",71,"less than high school","female",13,12,8,1,1,1,"Strongly Oppose",4,1,1
"143","2","very anxious",62,"some college","male",12,4,6,1,0,0,"Oppose",3,0,0
"144","3","a little anxious",37,"bachelor's degree or higher","male",13,7,5,0,1,0,"Oppose",3,0,0
"145","2","very anxious",36,"high school","female",5,3,6,1,0,0,"Oppose",3,0,0
"146","4","somewhat anxious",47,"some college","female",9,4,4,0,0,0,"Favor",3,0,0
"147","3","somewhat anxious",47,"bachelor's degree or higher","male",16,5,4,0,1,0,"Oppose",3,0,0
"148","1","very anxious",28,"bachelor's degree or higher","male",4,3,3,1,1,1,"Oppose",3,0,0
"149","2","somewhat anxious",34,"bachelor's degree or higher","female",11,5,6,1,0,0,"Oppose",2,0,0
"150","2","very anxious",69,"bachelor's degree or higher","male",10,3,4,1,0,0,"Favor",2,0,0
"151","3","a little anxious",47,"high school","male",12,10,8,0,1,0,"Oppose",3,0,1
"152","1","not anxious at all",73,"high school","male",11,11,8,1,1,1,"Strongly Oppose",4,0,1
"153","3","very anxious",63,"high school","female",10,3,3,0,1,0,"Strongly Oppose",2,0,0
"154","2","somewhat anxious",33,"less than high school","male",1,7,4,1,0,0,"Strongly Oppose",2,0,0
"155","1","somewhat anxious",42,"high school","female",6,7,4,1,1,1,"Oppose",2,0,0
"156","3","somewhat anxious",43,"high school","female",7,5,6,0,1,0,"Strongly Oppose",4,1,1
"157","4","very anxious",50,"bachelor's degree or higher","female",16,3,4,0,0,0,"Oppose",2,0,0
"158","2","somewhat anxious",56,"bachelor's degree or higher","male",10,6,7,1,0,0,"Strongly Oppose",3,0,1
"159","3","somewhat anxious",28,"some college","female",11,6,6,0,1,0,"Strongly Oppose",2,0,0
"160","1","somewhat anxious",44,"some college","female",13,8,8,1,1,1,"Oppose",4,0,0
"161","3","somewhat anxious",38,"bachelor's degree or higher","female",9,5,6,0,1,0,"Oppose",1,0,0
"162","1","not anxious at all",34,"bachelor's degree or higher","female",14,11,7,1,1,1,"Strongly Oppose",2,0,0
"163","2","very anxious",56,"some college","male",16,3,3,1,0,0,"Strongly Oppose",2,0,0
"164","3","somewhat anxious",47,"bachelor's degree or higher","male",11,4,6,0,1,0,"Oppose",2,0,0
"165","4","somewhat anxious",42,"bachelor's degree or higher","male",7,7,6,0,0,0,"Strongly Oppose",4,0,1
"166","3","somewhat anxious",53,"some college","female",16,4,5,0,1,0,"Strongly Oppose",2,0,0
"167","3","very anxious",38,"bachelor's degree or higher","female",11,4,4,0,1,0,"Strongly Favor",1,0,0
"168","2","somewhat anxious",50,"bachelor's degree or higher","female",11,6,4,1,0,0,"Favor",3,0,0
"169","3","a little anxious",21,"high school","male",15,8,7,0,1,0,"Strongly Oppose",3,0,1
"170","4","somewhat anxious",25,"some college","male",18,5,6,0,0,0,"Strongly Oppose",3,0,0
"171","3","very anxious",58,"high school","female",16,5,8,0,1,0,"Oppose",4,0,1
"172","4","somewhat anxious",39,"some college","male",10,5,7,0,0,0,"Strongly Oppose",3,1,0
"173","4","not anxious at all",26,"some college","female",7,12,8,0,0,0,"Strongly Oppose",4,0,0
"174","4","somewhat anxious",61,"some college","female",8,8,6,0,0,0,"Strongly Oppose",4,0,1
"175","1","somewhat anxious",29,"some college","female",11,5,4,1,1,1,"Oppose",1,0,0
"176","3","not anxious at all",39,"some college","female",12,12,7,0,1,0,"Strongly Oppose",4,0,1
"177","2","somewhat anxious",40,"bachelor's degree or higher","male",11,7,6,1,0,0,"Strongly Oppose",4,0,1
"178","1","somewhat anxious",30,"bachelor's degree or higher","female",11,4,4,1,1,1,"Strongly Favor",2,0,0
"179","2","very anxious",64,"bachelor's degree or higher","female",10,3,5,1,0,0,"Oppose",1,0,0
"180","2","a little anxious",50,"less than high school","male",5,10,7,1,0,0,"Strongly Oppose",3,0,1
"181","2","somewhat anxious",33,"bachelor's degree or higher","female",12,9,8,1,0,0,"Strongly Oppose",4,0,0
"182","3","somewhat anxious",35,"high school","male",9,6,6,0,1,0,"Oppose",4,0,1
"183","1","somewhat anxious",26,"bachelor's degree or higher","female",16,6,5,1,1,1,"Oppose",3,0,0
"184","1","not anxious at all",44,"some college","male",16,10,8,1,1,1,"Strongly Oppose",4,0,0
"185","1","somewhat anxious",44,"some college","male",13,6,6,1,1,1,"Oppose",4,0,1
"186","1","not anxious at all",25,"some college","male",11,12,8,1,1,1,"Strongly Oppose",4,1,1
"187","3","very anxious",44,"bachelor's degree or higher","male",17,3,4,0,1,0,"Oppose",1,0,0
"188","2","a little anxious",51,"bachelor's degree or higher","female",17,9,8,1,0,0,"Strongly Oppose",4,1,1
"189","2","very anxious",62,"bachelor's degree or higher","female",14,5,6,1,0,0,"Strongly Oppose",3,0,0
"190","4","very anxious",55,"bachelor's degree or higher","female",18,3,8,0,0,0,"Strongly Oppose",4,0,1
"191","3","somewhat anxious",43,"bachelor's degree or higher","male",13,5,6,0,1,0,"Strongly Oppose",3,0,1
"192","4","very anxious",53,"bachelor's degree or higher","male",12,3,3,0,0,0,"Strongly Oppose",3,1,1
"193","3","a little anxious",49,"some college","female",10,6,4,0,1,0,"Oppose",3,0,1
"194","3","somewhat anxious",34,"some college","male",11,5,4,0,1,0,"Favor",2,0,0
"195","4","not anxious at all",36,"high school","male",11,9,7,0,0,0,"Strongly Oppose",4,0,0
"196","2","very anxious",31,"bachelor's degree or higher","male",11,3,3,1,0,0,"Strongly Oppose",3,0,1
"197","4","somewhat anxious",57,"bachelor's degree or higher","female",15,5,5,0,0,0,"Strongly Oppose",2,0,0
"198","2","somewhat anxious",18,"less than high school","female",16,6,6,1,0,0,"Oppose",1,0,0
"199","3","somewhat anxious",37,"bachelor's degree or higher","female",12,5,6,0,1,0,"Strongly Oppose",3,0,0
"200","3","very anxious",63,"bachelor's degree or higher","male",16,3,4,0,1,0,"Strongly Oppose",1,0,0
"201","2","a little anxious",48,"bachelor's degree or higher","female",16,8,8,1,0,0,"Oppose",3,0,0
"202","4","not anxious at all",32,"high school","male",13,12,8,0,0,0,"Strongly Oppose",4,0,1
"203","2","a little anxious",28,"some college","female",9,7,5,1,0,0,"Oppose",2,0,0
"204","4","somewhat anxious",45,"high school","female",13,6,5,0,0,0,"Favor",3,0,0
"205","1","a little anxious",59,"some college","male",13,7,8,1,1,1,"Oppose",4,1,1
"206","4","not anxious at all",82,"high school","female",10,11,8,0,0,0,"Strongly Oppose",3,1,0
"207","2","very anxious",62,"bachelor's degree or higher","female",2,4,4,1,0,0,"Favor",2,0,0
"208","1","very anxious",35,"bachelor's degree or higher","female",19,4,5,1,1,1,"Oppose",3,0,0
"209","4","very anxious",47,"some college","female",15,4,5,0,0,0,"Oppose",1,0,1
"210","3","not anxious at all",65,"some college","male",15,11,8,0,1,0,"Strongly Oppose",2,0,0
"211","1","a little anxious",62,"high school","male",13,8,8,1,1,1,"Strongly Oppose",4,0,0
"212","4","a little anxious",59,"bachelor's degree or higher","female",18,7,7,0,0,0,"Strongly Oppose",4,0,1
"213","4","somewhat anxious",51,"bachelor's degree or higher","female",9,6,6,0,0,0,"Oppose",2,0,0
"214","1","somewhat anxious",33,"high school","female",12,8,6,1,1,1,"Strongly Oppose",4,0,0
"215","1","a little anxious",27,"some college","female",8,9,6,1,1,1,"Oppose",3,0,0
"216","2","somewhat anxious",54,"bachelor's degree or higher","female",10,5,3,1,0,0,"Strongly Oppose",2,1,0
"217","3","very anxious",58,"bachelor's degree or higher","male",5,3,2,0,1,0,"Favor",1,0,0
"218","2","very anxious",20,"some college","male",3,3,3,1,0,0,"Strongly Favor",2,0,0
"219","3","very anxious",47,"bachelor's degree or higher","male",5,3,3,0,1,0,"Oppose",3,0,0
"220","2","a little anxious",29,"high school","male",12,10,7,1,0,0,"Oppose",4,1,1
"221","3","not anxious at all",54,"high school","female",4,12,8,0,1,0,"Strongly Oppose",4,0,0
"222","1","a little anxious",24,"bachelor's degree or higher","female",7,7,6,1,1,1,"Oppose",3,0,0
"223","2","not anxious at all",47,"high school","female",10,12,8,1,0,0,"Strongly Oppose",4,1,1
"224","3","a little anxious",25,"some college","female",11,7,3,0,1,0,"Oppose",2,0,0
"225","4","somewhat anxious",28,"high school","male",10,5,6,0,0,0,"Oppose",3,0,0
"226","2","somewhat anxious",57,"bachelor's degree or higher","male",16,7,6,1,0,0,"Strongly Favor",3,0,1
"227","4","a little anxious",26,"high school","male",8,10,6,0,0,0,"Strongly Oppose",4,0,0
"228","1","a little anxious",43,"high school","male",7,7,7,1,1,1,"Strongly Favor",3,0,1
"229","4","somewhat anxious",35,"high school","male",12,6,6,0,0,0,"Strongly Oppose",4,0,1
"230","4","a little anxious",29,"bachelor's degree or higher","female",11,7,5,0,0,0,"Oppose",2,0,0
"231","2","very anxious",26,"some college","female",14,5,4,1,0,0,"Oppose",3,0,0
"232","3","not anxious at all",18,"high school","female",15,12,8,0,1,0,"Strongly Oppose",4,0,0
"233","4","very anxious",60,"bachelor's degree or higher","female",12,3,2,0,0,0,"Oppose",1,0,0
"234","4","very anxious",42,"bachelor's degree or higher","female",15,3,3,0,0,0,"Strongly Oppose",2,0,0
"235","1","a little anxious",29,"high school","female",15,10,8,1,1,1,"Strongly Oppose",4,0,1
"236","3","somewhat anxious",57,"bachelor's degree or higher","female",10,5,4,0,1,0,"Favor",1,0,0
"237","2","not anxious at all",53,"high school","female",14,10,8,1,0,0,"Strongly Oppose",4,0,1
"238","3","very anxious",27,"some college","male",6,3,6,0,1,0,"Strongly Oppose",3,0,0
"239","1","a little anxious",25,"bachelor's degree or higher","male",8,9,7,1,1,1,"Strongly Oppose",4,0,1
"240","3","somewhat anxious",37,"some college","female",7,7,4,0,1,0,"Strongly Oppose",2,0,0
"241","1","a little anxious",25,"some college","female",12,7,7,1,1,1,"Oppose",3,0,1
"242","1","very anxious",38,"bachelor's degree or higher","female",13,4,3,1,1,1,"Strongly Oppose",3,0,0
"243","1","somewhat anxious",39,"bachelor's degree or higher","female",15,5,5,1,1,1,"Strongly Oppose",3,0,0
"244","1","somewhat anxious",26,"some college","male",7,7,6,1,1,1,"Strongly Oppose",4,0,1
"245","4","very anxious",45,"bachelor's degree or higher","female",18,5,3,0,0,0,"Strongly Oppose",3,0,0
"246","2","somewhat anxious",27,"some college","male",13,5,7,1,0,0,"Favor",4,0,0
"247","3","very anxious",46,"high school","male",12,3,5,0,1,0,"Oppose",2,0,0
"248","1","somewhat anxious",62,"high school","male",3,5,2,1,1,1,"Strongly Oppose",3,0,0
"249","3","somewhat anxious",44,"high school","female",12,6,5,0,1,0,"Oppose",2,0,0
"250","3","somewhat anxious",65,"bachelor's degree or higher","male",9,6,8,0,1,0,"Strongly Oppose",3,0,0
"251","2","not anxious at all",34,"bachelor's degree or higher","male",8,12,7,1,0,0,"Oppose",3,0,0
"252","4","somewhat anxious",66,"high school","female",11,7,8,0,0,0,"Oppose",3,1,1
"253","3","very anxious",44,"high school","female",14,3,4,0,1,0,"Favor",2,0,0
"254","1","a little anxious",34,"high school","male",13,7,5,1,1,1,"Oppose",3,0,1
"255","4","a little anxious",43,"some college","male",10,11,8,0,0,0,"Strongly Oppose",4,0,0
"256","2","a little anxious",30,"high school","male",9,8,7,1,0,0,"Strongly Oppose",4,0,0
"257","1","not anxious at all",27,"some college","female",17,12,7,1,1,1,"Strongly Oppose",4,0,1
"258","1","a little anxious",20,"high school","female",17,8,4,1,1,1,"Oppose",2,0,1
"259","2","a little anxious",56,"high school","female",10,10,8,1,0,0,"Strongly Oppose",3,0,0
"260","2","not anxious at all",42,"high school","male",12,10,7,1,0,0,"Oppose",4,0,1
"261","3","somewhat anxious",44,"bachelor's degree or higher","male",17,7,6,0,1,0,"Oppose",1,0,0
"262","4","somewhat anxious",28,"bachelor's degree or higher","female",14,6,6,0,0,0,"Strongly Oppose",1,0,1
"263","2","very anxious",38,"bachelor's degree or higher","female",14,3,6,1,0,0,"Favor",2,0,0
"264","1","somewhat anxious",29,"bachelor's degree or higher","male",10,9,7,1,1,1,"Strongly Oppose",4,0,1
"265","4","very anxious",52,"some college","female",1,3,2,0,0,0,"Oppose",2,0,0
1 cond anx age educ gender income emo p_harm tone eth treat english immigr anti_info cong_mesg
2 1 3 a little anxious 45 high school male 13 7 6 0 1 0 Oppose 4 0 1
3 2 4 somewhat anxious 73 bachelor's degree or higher male 16 6 3 0 0 0 Favor 3 0 0
4 3 2 a little anxious 53 some college female 3 8 7 1 0 0 Strongly Oppose 3 0 0
5 4 1 not anxious at all 45 high school male 14 9 8 1 1 1 Strongly Oppose 4 0 1
6 5 3 somewhat anxious 55 some college female 12 5 5 0 1 0 Strongly Oppose 2 0 0
7 6 1 a little anxious 85 high school female 3 5 6 1 1 1 Strongly Oppose 4 0 0
8 7 1 a little anxious 58 high school female 10 10 8 1 1 1 Oppose 4 0 0
9 8 2 a little anxious 53 some college male 9 8 7 1 0 0 Favor 4 1 1
10 9 1 a little anxious 52 some college female 14 8 5 1 1 1 Strongly Oppose 3 0 0
11 10 4 very anxious 42 some college male 15 3 2 0 0 0 Oppose 2 0 0
12 11 4 a little anxious 38 bachelor's degree or higher female 9 11 8 0 0 0 Strongly Oppose 4 1 1
13 12 4 very anxious 38 high school male 6 9 8 0 0 0 Strongly Oppose 4 1 1
14 13 4 a little anxious 26 bachelor's degree or higher female 10 8 6 0 0 0 Oppose 3 0 1
15 14 1 not anxious at all 52 some college male 11 10 8 1 1 1 Strongly Oppose 4 0 1
16 15 1 very anxious 48 some college male 19 3 3 1 1 1 Oppose 2 0 0
17 16 2 not anxious at all 62 high school female 10 12 8 1 0 0 Strongly Oppose 4 1 1
18 17 1 not anxious at all 41 less than high school female 7 9 8 1 1 1 Oppose 4 0 0
19 18 3 somewhat anxious 54 high school male 11 6 6 0 1 0 Strongly Oppose 4 0 0
20 19 1 a little anxious 69 high school female 9 8 7 1 1 1 Strongly Oppose 4 0 0
21 20 1 somewhat anxious 71 less than high school male 6 6 6 1 1 1 Strongly Oppose 1 0 0
22 21 3 somewhat anxious 62 some college male 14 4 5 0 1 0 Oppose 2 0 0
23 22 2 very anxious 41 some college male 13 3 6 1 0 0 Strongly Oppose 3 0 0
24 23 3 a little anxious 60 high school female 11 7 7 0 1 0 Strongly Oppose 4 0 1
25 24 4 somewhat anxious 62 some college male 17 6 8 0 0 0 Oppose 4 0 1
26 25 4 somewhat anxious 31 bachelor's degree or higher male 13 7 5 0 0 0 Strongly Oppose 4 0 0
27 26 3 somewhat anxious 50 some college female 13 4 2 0 1 0 Strongly Oppose 2 0 0
28 27 3 a little anxious 48 high school male 7 9 5 0 1 0 Strongly Oppose 4 0 1
29 28 2 somewhat anxious 29 some college male 10 6 4 1 0 0 Strongly Favor 2 0 0
30 29 3 a little anxious 64 high school female 5 9 5 0 1 0 Oppose 4 0 0
31 30 3 very anxious 65 high school female 12 4 6 0 1 0 Strongly Oppose 4 0 1
32 31 4 not anxious at all 66 less than high school female 4 12 8 0 0 0 Oppose 4 0 0
33 32 1 not anxious at all 68 high school female 9 11 8 1 1 1 Strongly Oppose 4 0 1
34 33 4 somewhat anxious 43 high school female 15 6 6 0 0 0 Favor 3 0 0
35 34 3 a little anxious 57 bachelor's degree or higher female 12 7 5 0 1 0 Oppose 3 0 0
36 35 3 somewhat anxious 41 high school male 11 9 4 0 1 0 Strongly Oppose 4 0 0
37 36 2 somewhat anxious 85 bachelor's degree or higher male 13 7 7 1 0 0 Strongly Oppose 3 0 1
38 37 4 a little anxious 70 bachelor's degree or higher male 15 8 8 0 0 0 Strongly Oppose 4 0 1
39 38 3 a little anxious 65 bachelor's degree or higher male 14 8 6 0 1 0 Strongly Oppose 4 0 0
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"""
Simulate critical values for finite sample distribution
and estimate asymptotic expansion parameters for the lilliefors tests
"""
import datetime as dt
import gzip
import logging
import pickle
from collections import defaultdict
import numpy as np
import pandas as pd
from scipy import stats
from yapf.yapflib.yapf_api import FormatCode
import statsmodels.api as sm
NUM_SIM = 10000000
MAX_MEMORY = 2 ** 28
SAMPLE_SIZES = [3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19,
20, 25, 30, 40, 50, 100, 200, 400, 800, 1600]
MIN_SAMPLE_SIZE = {'normal': 4, 'exp': 3}
MAX_SIZE = max(SAMPLE_SIZES)
MAX_SIM_SIZE = MAX_MEMORY // (MAX_SIZE * 8)
PERCENTILES = [1, 5, 10, 25, 50, 75, 90, 92.5, 95, 97.5, 99, 99.5, 99.7, 99.9]
seed = 113682199084250344115761738871133961874
seed = np.array([(seed >> (32 * i)) % 2 ** 32 for i in range(4)],
dtype=np.uint32)
def simulations(sim_type, save=False):
rs = np.random.RandomState(seed)
remaining = NUM_SIM
results = defaultdict(list)
start = dt.datetime.now()
while remaining > 0:
this_iter = min(remaining, MAX_SIM_SIZE)
remaining -= this_iter
if sim_type == 'normal':
dist = rs.standard_normal
else:
dist = rs.standard_exponential
rvs = dist((MAX_SIZE, this_iter))
sample_sizes = [ss for ss in SAMPLE_SIZES if
ss >= MIN_SAMPLE_SIZE[sim_type]]
for ss in sample_sizes:
sample = rvs[:ss]
mu = sample.mean(0)
if sim_type == 'normal':
std = sample.std(0, ddof=1)
z = (sample - mu) / std
cdf_fn = stats.norm.cdf
else:
z = sample / mu
cdf_fn = stats.expon.cdf
z = np.sort(z, axis=0)
nobs = ss
cdf = cdf_fn(z)
plus = np.arange(1.0, nobs + 1) / nobs
d_plus = (plus[:, None] - cdf).max(0)
minus = np.arange(0.0, nobs) / nobs
d_minus = (cdf - minus[:, None]).max(0)
d = np.max(np.abs(np.c_[d_plus, d_minus]), 1)
results[ss].append(d)
logging.log(
logging.INFO,
'Completed {}, remaining {}'.format(
NUM_SIM - remaining, remaining
)
)
elapsed = dt.datetime.now() - start
rem = elapsed.total_seconds() / (NUM_SIM - remaining) * remaining
logging.log(logging.INFO,
f'({sim_type}) Time remaining {rem:0.1f}s')
for key in results:
results[key] = np.concatenate(results[key])
if save:
file_name = f'lilliefors-sim-{sim_type}-results.pkl.gz'
with gzip.open(file_name, 'wb', 5) as pkl:
pickle.dump(results, pkl)
crit_vals = {}
for key in results:
crit_vals[key] = np.percentile(results[key], PERCENTILES)
start = 20
num = len([k for k in crit_vals if k >= start])
all_x = np.zeros((num * len(PERCENTILES), len(PERCENTILES) + 2))
all_y = np.zeros(num * len(PERCENTILES))
loc = 0
for i, perc in enumerate(PERCENTILES):
y = pd.DataFrame(results).quantile(perc / 100.)
y = y.loc[start:]
all_y[loc:loc + len(y)] = np.log(y)
x = y.index.values.astype(float)
all_x[loc:loc + len(y), -2:] = np.c_[np.log(x), np.log(x) ** 2]
all_x[loc:loc + len(y), i:(i + 1)] = 1
loc += len(y)
w = np.ones_like(all_y).reshape(len(PERCENTILES), -1)
w[6:, -5:] = 3
w = w.ravel()
res = sm.WLS(all_y, all_x, weights=w).fit()
params = []
for i in range(len(PERCENTILES)):
params.append(np.r_[res.params[i], res.params[-2:]])
params = np.array(params)
df = pd.DataFrame(params).T
df.columns = PERCENTILES
asymp_crit_vals = {}
for col in df:
asymp_crit_vals[col] = df[col].values
code = f'{sim_type}_crit_vals = '
code += str(crit_vals).strip() + '\n\n'
code += '\n# Coefficients are model '
code += 'log(cv) = b[0] + b[1] log(n) + b[2] log(n)**2\n'
code += f'{sim_type}_asymp_crit_vals = '
code += str(asymp_crit_vals) + '\n\n'
return code
if __name__ == '__main__':
logging.getLogger().setLevel(logging.INFO)
header = '"""\nThis file is automatically generated by ' \
'littlefors_critical_values.py.\nDo not directly modify' \
'this file.\n\nValue based on 10,000,000 simulations."""\n\n'
header += 'from numpy import array\n\n'
header += 'PERCENTILES = ' + str(PERCENTILES).strip() + '\n\n'
header += 'SAMPLE_SIZES = ' + str(SAMPLE_SIZES).strip() + '\n\n'
normal = simulations('normal', True)
exp = simulations('exp', True)
footer = """
# Critical Value
critical_values = {'normal': normal_crit_vals,
'exp': exp_crit_vals}
asymp_critical_values = {'normal': normal_asymp_crit_vals,
'exp': exp_asymp_crit_vals}
"""
cv_filename = '../../_lilliefors_critical_values.py'
with open(cv_filename, 'w', newline='\n', encoding="utf-8") as cv:
cv.write(FormatCode(header)[0])
cv.write(FormatCode(normal)[0])
cv.write('\n\n')
cv.write(FormatCode(exp)[0])
cv.write('\n\n')
cv.write(FormatCode(footer)[0])

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@ -0,0 +1,40 @@
Case,LogRate,LogVolumne,resid_pearson,resid_deviance,hat_matrix_diagonal,dfb_intercept,dfb_lograte,dfb_logvolumne,Cooks C,Cooks Cbar,d_deviance,d_pearson_chi2
1,-0.1924,1.3083,0.2205,0.3082,0.0927,-0.0165,0.0193,0.0556,0.00548,0.00497,0.1,0.0536
2,0.0862,1.2528,0.1349,0.1899,0.0429,-0.0134,0.0151,0.0261,0.000853,0.000816,0.0369,0.019
3,0.9163,0.2231,0.2923,0.4049,0.0612,-0.0492,0.066,0.0589,0.00593,0.00557,0.1695,0.091
4,0.4055,-0.2877,3.5181,2.2775,0.0867,1.0734,-0.9302,-1.018,1.2873,1.1756,6.3626,13.5523
5,1.1632,-0.2231,0.5287,0.7021,0.1158,-0.0832,0.1411,0.0583,0.0414,0.0366,0.5296,0.3161
6,1.2528,-0.3567,0.609,0.7943,0.1524,-0.0922,0.171,0.0381,0.0787,0.0667,0.6976,0.4376
7,-0.2877,-0.5108,-0.0328,-0.0464,0.00761,-0.0028,0.00274,0.00265,8.321e-06,8.258e-06,0.00216,0.00109
8,0.5306,0.0953,-1.0196,-1.1939,0.0559,-0.1444,0.0613,0.057,0.0652,0.0616,1.487,1.1011
9,-0.2877,-0.1054,-0.0938,-0.1323,0.0342,-0.0178,0.0173,0.0153,0.000322,0.000311,0.0178,0.00911
10,-0.7985,-0.1054,-0.0293,-0.0414,0.00721,-0.00245,0.00246,0.00211,6.256e-06,6.211e-06,0.00172,0.000862
11,-0.5621,-0.2231,-0.037,-0.0523,0.00969,-0.00361,0.00358,0.00319,1.4e-05,1.3e-05,0.00274,0.00138
12,1.0116,-0.5978,-0.5073,-0.6768,0.1481,-0.1173,0.0647,0.1651,0.0525,0.0447,0.5028,0.3021
13,1.0986,-0.5108,-0.7751,-0.97,0.1628,-0.0931,-0.00946,0.1775,0.1395,0.1168,1.0577,0.7175
14,0.8459,0.3365,0.2559,0.3562,0.0551,-0.0414,0.0538,0.0527,0.00404,0.00382,0.1307,0.0693
15,1.3218,-0.2877,0.4352,0.589,0.1336,-0.094,0.1408,0.0643,0.0337,0.0292,0.3761,0.2186
16,0.4947,0.8329,0.1576,0.2215,0.0402,-0.0198,0.0234,0.0307,0.00108,0.00104,0.0501,0.0259
17,0.47,1.1632,0.0709,0.1001,0.0172,-0.0063,0.00701,0.00914,8.9e-05,8.8e-05,0.0101,0.00511
18,0.3471,-0.1625,2.9062,2.1192,0.0954,0.9595,-0.8279,-0.8477,0.9845,0.8906,5.3817,9.3363
19,0.0583,0.5306,-1.0718,-1.2368,0.1315,-0.2591,0.2024,-0.00488,0.2003,0.174,1.7037,1.3227
20,0.5878,0.5878,0.2405,0.3353,0.0525,-0.0331,0.0421,0.0518,0.00338,0.0032,0.1156,0.061
21,0.6931,-0.9163,-0.1076,-0.1517,0.0373,-0.018,0.0158,0.0208,0.000465,0.000448,0.0235,0.012
22,0.3075,-0.0513,-0.4193,-0.5691,0.1015,-0.1449,0.1237,0.1179,0.0221,0.0199,0.3437,0.1956
23,0.3001,0.3001,-1.0242,-1.1978,0.0761,-0.1961,0.1275,0.0357,0.0935,0.0864,1.5212,1.1355
24,0.3075,0.4055,-1.3684,-1.4527,0.0717,-0.1281,0.041,-0.1004,0.1558,0.1447,2.255,2.0171
25,0.5766,0.47,0.3347,0.4608,0.0587,-0.0403,0.057,0.0708,0.00741,0.00698,0.2193,0.119
26,0.4055,-0.5108,-0.1595,-0.2241,0.0548,-0.0366,0.0329,0.0373,0.00156,0.00147,0.0517,0.0269
27,0.4055,0.5878,0.3645,0.4995,0.0661,-0.0327,0.0496,0.0788,0.0101,0.00941,0.2589,0.1423
28,0.6419,-0.0513,-0.8989,-1.0883,0.0647,-0.1423,0.0617,0.1025,0.0597,0.0559,1.2404,0.8639
29,-0.0513,0.6419,0.8981,1.0876,0.1682,0.2367,-0.195,0.0286,0.1961,0.1631,1.346,0.9697
30,-0.9163,0.47,-0.0992,-0.14,0.0507,-0.0224,0.0227,0.0159,0.000554,0.000526,0.0201,0.0104
31,-0.2877,0.9933,0.6198,0.8064,0.2459,0.1165,-0.0996,0.1322,0.1661,0.1253,0.7755,0.5095
32,-3.5066,0.8544,-0.00073,-0.00103,2.2e-05,-3.22e-06,3.405e-06,2.48e-06,1.18e-11,1.18e-11,1.065e-06,5.324e-07
33,0.6043,0.0953,-1.2062,-1.3402,0.051,-0.0882,-0.0137,-0.00216,0.0824,0.0782,1.8744,1.5331
34,0.7885,0.0953,0.5447,0.7209,0.0601,-0.0425,0.0877,0.0671,0.0202,0.019,0.5387,0.3157
35,0.6931,0.1823,0.5404,0.7159,0.0552,-0.034,0.0755,0.0711,0.018,0.017,0.5295,0.3091
36,1.203,-0.2231,0.4828,0.6473,0.1177,-0.0867,0.1381,0.0631,0.0352,0.0311,0.4501,0.2641
37,0.6419,-0.0513,-0.8989,-1.0883,0.0647,-0.1423,0.0617,0.1025,0.0597,0.0559,1.2404,0.8639
38,0.6419,-0.2877,-0.4874,-0.6529,0.1,-0.1395,0.1032,0.1397,0.0293,0.0264,0.4526,0.2639
39,0.4855,0.2624,0.7053,0.8987,0.0531,0.0326,0.019,0.0489,0.0295,0.0279,0.8355,0.5254
1 Case LogRate LogVolumne resid_pearson resid_deviance hat_matrix_diagonal dfb_intercept dfb_lograte dfb_logvolumne Cooks C Cooks Cbar d_deviance d_pearson_chi2
2 1 -0.1924 1.3083 0.2205 0.3082 0.0927 -0.0165 0.0193 0.0556 0.00548 0.00497 0.1 0.0536
3 2 0.0862 1.2528 0.1349 0.1899 0.0429 -0.0134 0.0151 0.0261 0.000853 0.000816 0.0369 0.019
4 3 0.9163 0.2231 0.2923 0.4049 0.0612 -0.0492 0.066 0.0589 0.00593 0.00557 0.1695 0.091
5 4 0.4055 -0.2877 3.5181 2.2775 0.0867 1.0734 -0.9302 -1.018 1.2873 1.1756 6.3626 13.5523
6 5 1.1632 -0.2231 0.5287 0.7021 0.1158 -0.0832 0.1411 0.0583 0.0414 0.0366 0.5296 0.3161
7 6 1.2528 -0.3567 0.609 0.7943 0.1524 -0.0922 0.171 0.0381 0.0787 0.0667 0.6976 0.4376
8 7 -0.2877 -0.5108 -0.0328 -0.0464 0.00761 -0.0028 0.00274 0.00265 8.321e-06 8.258e-06 0.00216 0.00109
9 8 0.5306 0.0953 -1.0196 -1.1939 0.0559 -0.1444 0.0613 0.057 0.0652 0.0616 1.487 1.1011
10 9 -0.2877 -0.1054 -0.0938 -0.1323 0.0342 -0.0178 0.0173 0.0153 0.000322 0.000311 0.0178 0.00911
11 10 -0.7985 -0.1054 -0.0293 -0.0414 0.00721 -0.00245 0.00246 0.00211 6.256e-06 6.211e-06 0.00172 0.000862
12 11 -0.5621 -0.2231 -0.037 -0.0523 0.00969 -0.00361 0.00358 0.00319 1.4e-05 1.3e-05 0.00274 0.00138
13 12 1.0116 -0.5978 -0.5073 -0.6768 0.1481 -0.1173 0.0647 0.1651 0.0525 0.0447 0.5028 0.3021
14 13 1.0986 -0.5108 -0.7751 -0.97 0.1628 -0.0931 -0.00946 0.1775 0.1395 0.1168 1.0577 0.7175
15 14 0.8459 0.3365 0.2559 0.3562 0.0551 -0.0414 0.0538 0.0527 0.00404 0.00382 0.1307 0.0693
16 15 1.3218 -0.2877 0.4352 0.589 0.1336 -0.094 0.1408 0.0643 0.0337 0.0292 0.3761 0.2186
17 16 0.4947 0.8329 0.1576 0.2215 0.0402 -0.0198 0.0234 0.0307 0.00108 0.00104 0.0501 0.0259
18 17 0.47 1.1632 0.0709 0.1001 0.0172 -0.0063 0.00701 0.00914 8.9e-05 8.8e-05 0.0101 0.00511
19 18 0.3471 -0.1625 2.9062 2.1192 0.0954 0.9595 -0.8279 -0.8477 0.9845 0.8906 5.3817 9.3363
20 19 0.0583 0.5306 -1.0718 -1.2368 0.1315 -0.2591 0.2024 -0.00488 0.2003 0.174 1.7037 1.3227
21 20 0.5878 0.5878 0.2405 0.3353 0.0525 -0.0331 0.0421 0.0518 0.00338 0.0032 0.1156 0.061
22 21 0.6931 -0.9163 -0.1076 -0.1517 0.0373 -0.018 0.0158 0.0208 0.000465 0.000448 0.0235 0.012
23 22 0.3075 -0.0513 -0.4193 -0.5691 0.1015 -0.1449 0.1237 0.1179 0.0221 0.0199 0.3437 0.1956
24 23 0.3001 0.3001 -1.0242 -1.1978 0.0761 -0.1961 0.1275 0.0357 0.0935 0.0864 1.5212 1.1355
25 24 0.3075 0.4055 -1.3684 -1.4527 0.0717 -0.1281 0.041 -0.1004 0.1558 0.1447 2.255 2.0171
26 25 0.5766 0.47 0.3347 0.4608 0.0587 -0.0403 0.057 0.0708 0.00741 0.00698 0.2193 0.119
27 26 0.4055 -0.5108 -0.1595 -0.2241 0.0548 -0.0366 0.0329 0.0373 0.00156 0.00147 0.0517 0.0269
28 27 0.4055 0.5878 0.3645 0.4995 0.0661 -0.0327 0.0496 0.0788 0.0101 0.00941 0.2589 0.1423
29 28 0.6419 -0.0513 -0.8989 -1.0883 0.0647 -0.1423 0.0617 0.1025 0.0597 0.0559 1.2404 0.8639
30 29 -0.0513 0.6419 0.8981 1.0876 0.1682 0.2367 -0.195 0.0286 0.1961 0.1631 1.346 0.9697
31 30 -0.9163 0.47 -0.0992 -0.14 0.0507 -0.0224 0.0227 0.0159 0.000554 0.000526 0.0201 0.0104
32 31 -0.2877 0.9933 0.6198 0.8064 0.2459 0.1165 -0.0996 0.1322 0.1661 0.1253 0.7755 0.5095
33 32 -3.5066 0.8544 -0.00073 -0.00103 2.2e-05 -3.22e-06 3.405e-06 2.48e-06 1.18e-11 1.18e-11 1.065e-06 5.324e-07
34 33 0.6043 0.0953 -1.2062 -1.3402 0.051 -0.0882 -0.0137 -0.00216 0.0824 0.0782 1.8744 1.5331
35 34 0.7885 0.0953 0.5447 0.7209 0.0601 -0.0425 0.0877 0.0671 0.0202 0.019 0.5387 0.3157
36 35 0.6931 0.1823 0.5404 0.7159 0.0552 -0.034 0.0755 0.0711 0.018 0.017 0.5295 0.3091
37 36 1.203 -0.2231 0.4828 0.6473 0.1177 -0.0867 0.1381 0.0631 0.0352 0.0311 0.4501 0.2641
38 37 0.6419 -0.0513 -0.8989 -1.0883 0.0647 -0.1423 0.0617 0.1025 0.0597 0.0559 1.2404 0.8639
39 38 0.6419 -0.2877 -0.4874 -0.6529 0.1 -0.1395 0.1032 0.1397 0.0293 0.0264 0.4526 0.2639
40 39 0.4855 0.2624 0.7053 0.8987 0.0531 0.0326 0.019 0.0489 0.0295 0.0279 0.8355 0.5254

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@ -0,0 +1,491 @@
"""
Created on Tue Apr 7 11:31:21 2020
Author: Josef Perktold
License: BSD-3
"""
import numpy as np
from statsmodels.tools.testing import Holder
"""
example from Kacker 2004, computed with R metafor
> y = c(61.0, 61.4 , 62.21, 62.3 , 62.34, 62.6 , 62.7 , 62.84, 65.9)
> v = c(0.2025, 1.2100, 0.0900, 0.2025, 0.3844, 0.5625, 0.0676, 0.0225, 1.8225)
> res = rma(y, v, data=dat, method="PM", control=list(tol=1e-9))
> convert_items(res, prefix="exk1_metafor.")
"""
exk1_metafor = Holder()
exk1_metafor.b = 62.4076199113286
exk1_metafor.beta = 62.4076199113286
exk1_metafor.se = 0.338030602684471
exk1_metafor.zval = 184.621213037276
exk1_metafor.pval = 0
exk1_metafor.ci_lb = 61.7450921043947
exk1_metafor.ci_ub = 63.0701477182625
exk1_metafor.vb = 0.114264688351227
exk1_metafor.tau2 = 0.705395309224248
exk1_metafor.se_tau2 = 0.51419109758052
exk1_metafor.tau2_f = 0.705395309224248
exk1_metafor.k = 9
exk1_metafor.k_f = 9
exk1_metafor.k_eff = 9
exk1_metafor.k_all = 9
exk1_metafor.p = 1
exk1_metafor.p_eff = 1
exk1_metafor.parms = 2
exk1_metafor.m = 1
exk1_metafor.QE = 24.801897741835
exk1_metafor.QEp = 0.00167935146372742
exk1_metafor.QM = 34084.9923033553
exk1_metafor.QMp = 0
exk1_metafor.I2 = 83.7218626490482
exk1_metafor.H2 = 6.14320900751909
exk1_metafor.yi = np.array([
61, 61.4, 62.21, 62.3, 62.34, 62.6, 62.7, 62.84, 65.9
])
exk1_metafor.vi = np.array([
0.2025, 1.21, 0.09, 0.2025, 0.3844, 0.5625, 0.0676, 0.0225, 1.8225
])
exk1_metafor.X = np.array([
1, 1, 1, 1, 1, 1, 1, 1, 1
]).reshape(9, 1, order='F')
exk1_metafor.yi_f = np.array([
61, 61.4, 62.21, 62.3, 62.34, 62.6, 62.7, 62.84, 65.9
])
exk1_metafor.vi_f = np.array([
0.2025, 1.21, 0.09, 0.2025, 0.3844, 0.5625, 0.0676, 0.0225, 1.8225
])
exk1_metafor.X_f = np.array([
1, 1, 1, 1, 1, 1, 1, 1, 1
]).reshape(9, 1, order='F')
exk1_metafor.M = np.array([
0.907895309224248, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1.91539530922425, 0, 0, 0, 0,
0, 0, 0, 0, 0, 0.795395309224248, 0, 0, 0, 0, 0, 0, 0, 0, 0,
0.907895309224248, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1.08979530922425, 0, 0, 0,
0, 0, 0, 0, 0, 0, 1.26789530922425, 0, 0, 0, 0, 0, 0, 0, 0, 0,
0.772995309224248, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.727895309224248, 0, 0, 0,
0, 0, 0, 0, 0, 0, 2.52789530922425
]).reshape(9, 9, order='F')
exk1_metafor.ids = np.array([
1, 2, 3, 4, 5, 6, 7, 8, 9
])
exk1_metafor.slab = np.array([
1, 2, 3, 4, 5, 6, 7, 8, 9
])
exk1_metafor.measure = 'GEN'
exk1_metafor.method = 'PM'
exk1_metafor.test = 'z'
exk1_metafor.s2w = 1
exk1_metafor.btt = 1
exk1_metafor.digits = np.array([
4, 4, 4, 4, 4, 4, 4, 4, 4
])
exk1_metafor.level = 0.05
exk1_metafor.add = 0.5
exk1_metafor.to = 'only0'
exk1_metafor.fit_stats = np.array([
-12.722152033808, 21.73438033144, 29.4443040676159, 29.8387532222884,
31.4443040676159, -11.7892200590463, 23.5784401180925, 27.5784401180925,
27.7373232014522, 29.9784401180925
]).reshape(5, 2, order='F')
exk1_metafor.model = 'rma.uni'
# > res = rma(y, v, data=dat, method="DL", control=list(tol=1e-9))
# > convert_items(res, prefix="exk1_dl.")
exk1_dl = Holder()
exk1_dl.b = 62.3901386044504
exk1_dl.beta = 62.3901386044504
exk1_dl.se = 0.245749668040304
exk1_dl.zval = 253.876797075543
exk1_dl.pval = 0
exk1_dl.ci_lb = 61.9084781058787
exk1_dl.ci_ub = 62.8717991030221
exk1_dl.vb = 0.0603928993419195
exk1_dl.tau2 = 0.288049246973751
exk1_dl.se_tau2 = 0.269366223207558
exk1_dl.tau2_f = 0.288049246973751
exk1_dl.k = 9
exk1_dl.k_f = 9
exk1_dl.k_eff = 9
exk1_dl.k_all = 9
exk1_dl.p = 1
exk1_dl.p_eff = 1
exk1_dl.parms = 2
exk1_dl.m = 1
exk1_dl.QE = 24.801897741835
exk1_dl.QEp = 0.00167935146372742
exk1_dl.QM = 64453.4280933367
exk1_dl.QMp = 0
exk1_dl.I2 = 67.744403741711
exk1_dl.H2 = 3.10023721772938
# > res = rma(y, v, data=dat, method="DL", test="knha", control=list(tol=1e-9))
# > convert_items(res, prefix="exk1_dl_hksj.")
exk1_dl_hksj = Holder()
exk1_dl_hksj.b = 62.3901386044504
exk1_dl_hksj.beta = 62.3901386044504
exk1_dl_hksj.se = 0.29477605699879
exk1_dl_hksj.zval = 211.652666908108
exk1_dl_hksj.pval = 2.77938607433693e-16
exk1_dl_hksj.ci_lb = 61.710383798052
exk1_dl_hksj.ci_ub = 63.0698934108488
exk1_dl_hksj.vb = 0.0868929237797541
exk1_dl_hksj.tau2 = 0.288049246973751
exk1_dl_hksj.se_tau2 = 0.269366223207558
exk1_dl_hksj.tau2_f = 0.288049246973751
exk1_dl_hksj.k = 9
exk1_dl_hksj.k_f = 9
exk1_dl_hksj.k_eff = 9
exk1_dl_hksj.k_all = 9
exk1_dl_hksj.p = 1
exk1_dl_hksj.p_eff = 1
exk1_dl_hksj.parms = 2
exk1_dl_hksj.m = 1
exk1_dl_hksj.QE = 24.801897741835
exk1_dl_hksj.QEp = 0.00167935146372742
exk1_dl_hksj.QM = 44796.8514093144
exk1_dl_hksj.QMp = 2.77938607433693e-16
exk1_dl_hksj.I2 = 67.744403741711
exk1_dl_hksj.H2 = 3.10023721772938
# > res = rma(y, v, data=dat, method="FE", control=list(tol=1e-9))
# > convert_items(res, prefix="exk1_fe.")
exk1_fe = Holder()
exk1_fe.b = 62.5833970939982
exk1_fe.beta = 62.5833970939982
exk1_fe.se = 0.107845705498231
exk1_fe.zval = 580.304953311515
exk1_fe.pval = 0
exk1_fe.ci_lb = 62.3720233953344
exk1_fe.ci_ub = 62.7947707926621
exk1_fe.vb = 0.0116306961944112
exk1_fe.tau2 = 0
exk1_fe.tau2_f = 0
exk1_fe.k = 9
exk1_fe.k_f = 9
exk1_fe.k_eff = 9
exk1_fe.k_all = 9
exk1_fe.p = 1
exk1_fe.p_eff = 1
exk1_fe.parms = 1
exk1_fe.m = 1
exk1_fe.QE = 24.801897741835
exk1_fe.QEp = 0.00167935146372742
exk1_fe.QM = 336753.838837879
exk1_fe.QMp = 0
exk1_fe.I2 = 67.744403741711
exk1_fe.H2 = 3.10023721772938
# > res = rma(y, v, data=dat, method="FE", test="knha", control=list(tol=1e-9))
# Warning message:
# In rma(y, v, data = dat, method = "FE", test = "knha",
# control = list(tol = 1e-09)) :
# Knapp & Hartung method is not meant to be used in the context of FE models.
# > convert_items(res, prefix="exk1_fe_hksj.")
exk1_fe_hksj = Holder()
exk1_fe_hksj.b = 62.5833970939982
exk1_fe_hksj.beta = 62.5833970939982
exk1_fe_hksj.se = 0.189889223522271
exk1_fe_hksj.zval = 329.57845597098
exk1_fe_hksj.pval = 8.04326466920145e-18
exk1_fe_hksj.ci_lb = 62.1455117593252
exk1_fe_hksj.ci_ub = 63.0212824286713
exk1_fe_hksj.vb = 0.0360579172098909
exk1_fe_hksj.tau2 = 0
exk1_fe_hksj.tau2_f = 0
exk1_fe_hksj.k = 9
exk1_fe_hksj.k_f = 9
exk1_fe_hksj.k_eff = 9
exk1_fe_hksj.k_all = 9
exk1_fe_hksj.p = 1
exk1_fe_hksj.p_eff = 1
exk1_fe_hksj.parms = 1
exk1_fe_hksj.m = 1
exk1_fe_hksj.QE = 24.801897741835
exk1_fe_hksj.QEp = 0.00167935146372742
exk1_fe_hksj.QM = 108621.958640215
exk1_fe_hksj.QMp = 8.04326466920145e-18
exk1_fe_hksj.I2 = 67.744403741711
exk1_fe_hksj.H2 = 3.10023721772938
# effect size for proportions, metafor `escalc` function
# > library(metafor)
# > dat <- dat.fine1993
# > dat_or <- escalc(measure="OR", ai=e2i, n1i=nei, ci=c2i, n2i=nci, data=dat,
# var.names=c("y2i","v2i"))
# > r = dat_or[c("y2i", "v2i")]
# > cat_items(r)
y_or = np.array([
0.13613217432458, 0.768370601797533, 0.374938517449009, 1.65822807660353,
0.784954729813068, 0.361663949151077, 0.575364144903562,
0.250542525502324, 0.650587566141149, 0.0918075492531228,
0.273865253802803, 0.485755524477543, 0.182321556793955,
0.980829253011726, 1.31218638896617, -0.259511195485084, 0.138402322859119
])
v_or = np.array([
0.399242424242424, 0.244867149758454, 0.152761481951271, 0.463095238095238,
0.189078465394255, 0.0689052107900588, 0.240651709401709,
0.142027027027027, 0.280657748049052, 0.210140736456526,
0.0373104717196078, 0.0427774287950624, 0.194901960784314,
0.509259259259259, 1.39835164835165, 0.365873015873016, 0.108630952380952
])
# > dat_rr <- escalc(measure="RR", ai=e2i, n1i=nei, ci=c2i, n2i=nci, data=dat,
# var.names=c("y2i","v2i"))
# > r = dat_rr[c("y2i", "v2i")]
# > cat_items(r)
y_rr = np.array([
0.0595920972022457, 0.434452644981417, 0.279313822781264,
0.934309237376833, 0.389960921572199, 0.219327702635984,
0.328504066972036, 0.106179852041229, 0.28594445255324,
0.0540672212702757, 0.164912297594691, 0.300079561474504,
0.0813456394539525, 0.693147180559945, 0.177206456127184,
-0.131336002061087, 0.0622131845015728
])
v_rr = np.array([
0.0761562998405104, 0.080905695611578, 0.0856909430438842,
0.175974025974026, 0.0551968864468864, 0.0267002515563729,
0.074017094017094, 0.0257850995555914, 0.0590338164251208,
0.073266499582289, 0.0137191240428942, 0.0179386112192693,
0.0400361415752742, 0.3, 0.0213675213675214, 0.0922402159244264,
0.021962676962677
])
# > dat_rd <- escalc(measure="RD", ai=e2i, n1i=nei, ci=c2i, n2i=nci, data=dat,
# var.names=c("y2i","v2i"))
# > r = dat_rd[c("y2i", "v2i")]
# > cat_items(r)
y_rd = np.array([
0.0334928229665072, 0.186554621848739, 0.071078431372549,
0.386363636363636, 0.19375, 0.0860946401581211, 0.14, 0.0611028315946349,
0.158888888888889, 0.0222222222222222, 0.0655096935584741,
0.114173373020248, 0.045021186440678, 0.2, 0.150793650793651,
-0.0647773279352226, 0.0342342342342342
])
v_rd = np.array([
0.0240995805934916, 0.0137648162576944, 0.00539777447807907,
0.0198934072126221, 0.0109664132254464, 0.00376813659489987,
0.0142233846153846, 0.00842011053321928, 0.0163926076817558,
0.0122782676856751, 0.00211164860232433, 0.00219739135615223,
0.0119206723560942, 0.016, 0.014339804116826, 0.0226799351233969,
0.00663520262409963
])
# > dat_as <- escalc(measure="AS", ai=e2i, n1i=nei, ci=c2i, n2i=nci, data=dat,
# var.names=c("y2i","v2i"))
# > r = dat_as[c("y2i", "v2i")]
# > cat_items(r)
y_as = np.array([
0.0337617513001424, 0.189280827304914, 0.0815955178338458,
0.399912703180945, 0.194987153482868, 0.0882233598093272,
0.141897054604164, 0.0618635353537276, 0.160745373792417,
0.0225840453649413, 0.0669694915300637, 0.117733830714136,
0.0452997410410423, 0.221071594001477, 0.220332915310739,
-0.0648275244591966, 0.0344168494848509
])
v_as = np.array([
0.0245215311004785, 0.0144957983193277, 0.00714869281045752,
0.0238636363636364, 0.0113839285714286, 0.00402569468666434,
0.0146153846153846, 0.00864381520119225, 0.0169444444444444,
0.0126984126984127, 0.0022181832395247, 0.00242071803917245,
0.0120497881355932, 0.0222222222222222, 0.0317460317460317,
0.0227732793522267, 0.00671171171171171
])
eff_prop1 = Holder(y_rd=y_rd, v_rd=v_rd, y_rr=y_rr, v_rr=v_rr,
y_or=y_or, v_or=v_or, y_as=y_as, v_as=v_as)
# package meta metabin OR
NA = np.nan # for R output
results_or_dl_hk = Holder()
# > res_mb_hk = metabin(e2i, nei, c2i, nci, data=dat2, sm="OR",
# Q.Cochrane=FALSE, method="Inverse", method.tau="DL", hakn=TRUE,
# backtransf=FALSE)
# > cat_items(res_mb_hk, prefix="results_or_dl_hk.")
results_or_dl_hk.event_e = np.array([
18, 22, 21, 14, 42, 80, 13, 37, 23, 19, 106, 170, 34, 18, 13, 12, 42
])
results_or_dl_hk.n_e = np.array([
19, 34, 72, 22, 70, 183, 26, 61, 36, 45, 246, 386, 59, 45, 14, 26, 74
])
results_or_dl_hk.event_c = np.array([
12, 12, 15, 5, 13, 33, 18, 30, 12, 14, 76, 46, 17, 3, 14, 10, 40
])
results_or_dl_hk.n_c = np.array([
22, 35, 68, 20, 32, 94, 50, 55, 25, 35, 208, 141, 32, 15, 18, 19, 75
])
results_or_dl_hk.method = 'Inverse'
results_or_dl_hk.incr = 0.5
results_or_dl_hk.Q_CMH = 24.9044036917599
results_or_dl_hk.df_Q_CMH = 1
results_or_dl_hk.pval_Q_CMH = 6.02446516918864e-07
results_or_dl_hk.incr_e = np.array([
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
])
results_or_dl_hk.incr_c = np.array([
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
])
results_or_dl_hk.studlab = np.array([
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17
])
results_or_dl_hk.TE = np.array([
2.70805020110221, 1.25672336971146, 0.374938517449009, 1.65822807660353,
0.784954729813068, 0.361663949151077, 0.575364144903562,
0.250542525502324, 0.650587566141149, 0.0918075492531229,
0.273865253802803, 0.485755524477543, 0.182321556793955,
0.980829253011726, 1.31218638896617, -0.259511195485085, 0.138402322859119
])
results_or_dl_hk.seTE = np.array([
1.1130538571376, 0.505568465186247, 0.390847133738078, 0.680511012471685,
0.434831536798166, 0.26249802054503, 0.490562645746402, 0.376864733063505,
0.529771411128472, 0.458411099840008, 0.193159187510219,
0.206827050443269, 0.441477021807833, 0.713624032148063, 1.18251919576455,
0.604874380241894, 0.329592099997789
])
results_or_dl_hk.lower = np.array([
0.526504728259124, 0.265827386227229, -0.391107788138334,
0.324451001076142, -0.0672994216535403, -0.152822717130236,
-0.386120972920066, -0.488098778345447, -0.387745319709617,
-0.806661696546688, -0.104719797000245, 0.0803819545800872,
-0.682957505951402, -0.41784814850073, -1.00550864575963,
-1.44504319593018, -0.507586322725471
])
results_or_dl_hk.upper = np.array([
4.8895956739453, 2.2476193531957, 1.14098482303635, 2.99200515213092,
1.63720888127968, 0.87615061543239, 1.53684926272719, 0.989183829350096,
1.68892045199192, 0.990276795052934, 0.65245030460585, 0.891129094374998,
1.04760061953931, 2.37950665452418, 3.62988142369196, 0.926020804960014,
0.784390968443709
])
results_or_dl_hk.zval = np.array([
2.43299116546472, 2.48576297030017, 0.959297088514073, 2.43673951811695,
1.80519273186346, 1.37777781485798, 1.17286578970589, 0.664807564946931,
1.22805336882057, 0.200273399324678, 1.41782152499639, 2.34860731919001,
0.412980852428863, 1.37443416817026, 1.10965335164625, -0.429033207492279,
0.419920024964335
])
results_or_dl_hk.pval = np.array([
0.0149746662574385, 0.012927403688425, 0.337409101687073,
0.0148203508441569, 0.0710445278963136, 0.168271897623853,
0.240849630303111, 0.50617358344946, 0.21942693438385, 0.841266765353313,
0.15624287815226, 0.0188437679780689, 0.67962064241999, 0.169306934699306,
0.267148431658854, 0.667899058451397, 0.674543878468201
])
results_or_dl_hk.w_fixed = np.array([
0.807174887892376, 3.91237113402062, 6.54615278162192, 2.15938303341902,
5.28880958450166, 14.5126905285409, 4.15538290788013, 7.04091341579448,
3.5630585898709, 4.75871559633028, 26.8021269609001, 23.3768140855494,
5.1307847082495, 1.96363636363636, 0.715127701375246, 2.73318872017354,
9.2054794520548
])
results_or_dl_hk.w_random = np.array([
0.806082838403413, 3.8868480814364, 6.47501150011912, 2.15158503393154,
5.24227532998639, 14.1675952027965, 4.12660238520421, 6.95867952431796,
3.54187734484692, 4.72100880622866, 25.6483453428049, 22.4942390635843,
5.0869781966579, 1.95718594121596, 0.714270384745876, 2.72070780232418,
9.06541462543771
])
results_or_dl_hk.TE_fixed = 0.428036725396544
results_or_dl_hk.seTE_fixed = 0.0902874968199668
results_or_dl_hk.lower_fixed = 0.251076483375135
results_or_dl_hk.upper_fixed = 0.604996967417954
results_or_dl_hk.zval_fixed = 4.74081949851871
results_or_dl_hk.pval_fixed = 2.12855503378502e-06
results_or_dl_hk.TE_random = 0.429520368698268
results_or_dl_hk.seTE_random = 0.0915952752397692
results_or_dl_hk.lower_random = 0.235347059333852
results_or_dl_hk.upper_random = 0.623693678062684
results_or_dl_hk.zval_random = 4.68932887175579
results_or_dl_hk.pval_random = 0.000246175101510513
results_or_dl_hk.null_effect = 0
results_or_dl_hk.seTE_predict = 0.100339885576592
results_or_dl_hk.lower_predict = 0.215650965184522
results_or_dl_hk.upper_predict = 0.643389772212014
results_or_dl_hk.level_predict = 0.95
results_or_dl_hk.k = 17
results_or_dl_hk.Q = 16.181374262823
results_or_dl_hk.df_Q = 16
results_or_dl_hk.pval_Q = 0.440375456698129
results_or_dl_hk.tau2 = 0.0016783981912744
results_or_dl_hk.se_tau2 = 0.0529437644950009
results_or_dl_hk.lower_tau2 = 0
results_or_dl_hk.upper_tau2 = 0.45893520964914
results_or_dl_hk.tau = 0.0409682583383086
results_or_dl_hk.lower_tau = 0
results_or_dl_hk.upper_tau = 0.677447569668045
results_or_dl_hk.method_tau_ci = 'J'
results_or_dl_hk.sign_lower_tau = ''
results_or_dl_hk.sign_upper_tau = ''
results_or_dl_hk.H = 1.00565197331206
results_or_dl_hk.lower_H = 1
results_or_dl_hk.upper_H = 1.43793739981697
results_or_dl_hk.I2 = 0.0112088293538659
results_or_dl_hk.lower_I2 = 0
results_or_dl_hk.upper_I2 = 0.516362418389019
results_or_dl_hk.Rb = 0.0117679262339789
results_or_dl_hk.lower_Rb = 0
results_or_dl_hk.upper_Rb = 0.725656377301252
results_or_dl_hk.approx_TE = np.array([
'', '', '', '', '', '', '', '', '', '', '', '', '', '', '', '', ''
])
results_or_dl_hk.approx_seTE = np.array([
'', '', '', '', '', '', '', '', '', '', '', '', '', '', '', '', ''
])
results_or_dl_hk.sm = 'OR'
results_or_dl_hk.level = 0.95
results_or_dl_hk.level_comb = 0.95
results_or_dl_hk.df_hakn = 16
results_or_dl_hk.method_tau = 'DL'
results_or_dl_hk.method_bias = 'score'
results_or_dl_hk.title = ''
results_or_dl_hk.complab = ''
results_or_dl_hk.outclab = ''
results_or_dl_hk.label_e = 'Experimental'
results_or_dl_hk.label_c = 'Control'
results_or_dl_hk.label_left = ''
results_or_dl_hk.label_right = ''
results_or_dl_hk.data = np.array([
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 19, 34, 72, 22,
70, 183, 26, 61, 36, 45, 246, 386, 59, 45, 14, 26, 74, 22, 35, 68, 20, 32,
94, 50, 55, 25, 35, 208, 141, 32, 15, 18, 19, 75, 16, 22, 44, 19, 62, 130,
24, 51, 30, 43, 169, 279, 56, 42, 14, 21, NA, 20, 22, 40, 12, 27, 65, 30,
44, 17, 35, 139, 97, 30, 10, 18, 15, NA, 18, 22, 21, 14, 42, 80, 13, 37,
23, 19, 106, 170, 34, 18, 13, 12, 42, 12, 12, 15, 5, 13, 33, 18, 30, 12,
14, 76, 46, 17, 3, 14, 10, 40, 4, 15, 10, 5, 26, 47, 5, 19, 13, 8, 67, 97,
21, 9, 12, 6, NA, 8, 8, 3, 4, 6, 14, 10, 19, 4, 4, 42, 21, 9, 1, 13, 4,
NA, 4, 15, 3, 2, 15, 30, 3, 11, 10, 6, 51, 73, 20, 9, 9, 5, 23, 3, 6, 0,
3, 5, 11, 9, 15, 4, 0, 35, 8, 7, 1, 12, 1, 30, 18, 22, 21, 14, 42, 80, 13,
37, 23, 19, 106, 170, 34, 18, 13, 12, 42, 19, 34, 72, 22, 70, 183, 26, 61,
36, 45, 246, 386, 59, 45, 14, 26, 74, 12, 12, 15, 5, 13, 33, 18, 30, 12,
14, 76, 46, 17, 3, 14, 10, 40, 22, 35, 68, 20, 32, 94, 50, 55, 25, 35,
208, 141, 32, 15, 18, 19, 75, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13,
14, 15, 16, 17, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5,
0.5, 0.5, 0.5, 0.5, 0.5, 0.5
]).reshape(17, 17, order='F')
results_or_dl_hk.byseparator = ' = '
results_or_dl_hk.pscale = 1
results_or_dl_hk.irscale = 1
results_or_dl_hk.irunit = 'person-years'
results_or_dl_hk.version = '4.11-0'

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@ -0,0 +1,78 @@
"""Test values for multinomial_proportion_confint.
Author: Sébastien Lerique
"""
import collections
import numpy as np
from statsmodels.tools.testing import Holder
res_multinomial = collections.defaultdict(Holder)
# The following examples come from the Sison & Glaz paper, and the values were
# computed using the R MultinomialCI package.
# Floating-point arithmetic errors get blown up in the Edgeworth expansion
# (starting in g1 and g2, but mostly when computing f, because of the
# polynomials), which explains why we only obtain a precision of 4 decimals
# when comparing to values computed in R.
# We test with any method name that starts with 'sison', as that is the
# criterion.
key1 = ('sison', 'Sison-Glaz example 1')
res_multinomial[key1].proportions = [56, 72, 73, 59, 62, 87, 58]
res_multinomial[key1].cis = np.array([
[.07922912, .1643361], [.11349036, .1985973],
[.11563169, .2007386], [.08565310, .1707601],
[.09207709, .1771840], [.14561028, .2307172],
[.08351178, .1686187]])
res_multinomial[key1].precision = 4
key2 = ('sisonandglaz', 'Sison-Glaz example 2')
res_multinomial[key2].proportions = [5] * 50
res_multinomial[key2].cis = [0, .05304026] * np.ones((50, 2))
res_multinomial[key2].precision = 4
key3 = ('sison-whatever', 'Sison-Glaz example 3')
res_multinomial[key3].proportions = (
[1] * 10 + [12] * 10 + [5] * 10 + [3] * 10 + [4] * 10)
res_multinomial[key3].cis = np.concatenate([
[0, .04120118] * np.ones((10, 2)),
[.012, .08520118] * np.ones((10, 2)),
[0, .05720118] * np.ones((10, 2)),
[0, .04920118] * np.ones((10, 2)),
[0, .05320118] * np.ones((10, 2))
])
res_multinomial[key3].precision = 4
# The examples from the Sison & Glaz paper only include 3 decimals.
gkey1 = ('goodman', 'Sison-Glaz example 1')
res_multinomial[gkey1].proportions = [56, 72, 73, 59, 62, 87, 58]
res_multinomial[gkey1].cis = np.array([
[.085, .166],
[.115, .204],
[.116, .207],
[.091, .173],
[.096, .181],
[.143, .239],
[.089, .171]])
res_multinomial[gkey1].precision = 3
gkey2 = ('goodman', 'Sison-Glaz example 2')
res_multinomial[gkey2].proportions = [5] * 50
res_multinomial[gkey2].cis = [.005, .075] * np.ones((50, 2))
res_multinomial[gkey2].precision = 3
gkey3 = ('goodman', 'Sison-Glaz example 3')
res_multinomial[gkey3].proportions = (
[1] * 10 + [12] * 10 + [5] * 10 + [3] * 10 + [4] * 10)
res_multinomial[gkey3].cis = np.concatenate([
[0, .049] * np.ones((10, 2)),
[.019, .114] * np.ones((10, 2)),
[.005, .075] * np.ones((10, 2)),
[.002, .062] * np.ones((10, 2)),
[.004, .069] * np.ones((10, 2))
])
res_multinomial[gkey3].precision = 3

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import numpy as np
from statsmodels.tools.tools import Bunch
cov_clu_stata = np.array([
.00025262993207,
-.00065043385106,
.20961897960949,
-.00065043385106,
.00721940994738,
-1.2171040967615,
.20961897960949,
-1.2171040967615,
417.18890043724]).reshape(3, 3)
cov_pnw0_stata = np.array([
.00004638910396,
-.00006781406833,
-.00501232990882,
-.00006781406833,
.00238784043122,
-.49683062350622,
-.00501232990882,
-.49683062350622,
133.97367476797]).reshape(3, 3)
cov_pnw1_stata = np.array([
.00007381482253,
-.00009936717692,
-.00613513582975,
-.00009936717692,
.00341979122583,
-.70768252183061,
-.00613513582975,
-.70768252183061,
197.31345000598]).reshape(3, 3)
cov_pnw4_stata = np.array([
.0001305958131,
-.00022910455176,
.00889686530849,
-.00022910455176,
.00468152667913,
-.88403667445531,
.00889686530849,
-.88403667445531,
261.76140136858]).reshape(3, 3)
cov_dk0_stata = np.array([
.00005883478135,
-.00011241470772,
-.01670183921469,
-.00011241470772,
.00140649264687,
-.29263014921586,
-.01670183921469,
-.29263014921586,
99.248049966902]).reshape(3, 3)
cov_dk1_stata = np.array([
.00009855800275,
-.00018443722054,
-.03257408922788,
-.00018443722054,
.00205106413403,
-.3943459697384,
-.03257408922788,
-.3943459697384,
140.50692606398]).reshape(3, 3)
cov_dk4_stata = np.array([
.00018052657317,
-.00035661054613,
-.06728261073866,
-.00035661054613,
.0024312795189,
-.32394785247278,
-.06728261073866,
-.32394785247278,
148.60456447156]).reshape(3, 3)
results = Bunch(
cov_clu_stata=cov_clu_stata,
cov_pnw0_stata=cov_pnw0_stata,
cov_pnw1_stata=cov_pnw1_stata,
cov_pnw4_stata=cov_pnw4_stata,
cov_dk0_stata=cov_dk0_stata,
cov_dk1_stata=cov_dk1_stata,
cov_dk4_stata=cov_dk4_stata
)

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"""
Created on Thu Feb 28 13:23:09 2013
Author: Josef Perktold
"""
import collections
from statsmodels.tools.testing import Holder
# numbers from R package `pwr` pwr.chisq.test
pwr_chisquare = collections.defaultdict(Holder)
pwr_chisquare[0].w = 1e-04
pwr_chisquare[0].N = 5
pwr_chisquare[0].df = 4
pwr_chisquare[0].sig_level = 0.05
pwr_chisquare[0].power = 0.05000000244872708
pwr_chisquare[0].method = 'Chi squared power calculation'
pwr_chisquare[0].note = 'N is the number of observations'
pwr_chisquare[1].w = 0.005
pwr_chisquare[1].N = 5
pwr_chisquare[1].df = 4
pwr_chisquare[1].sig_level = 0.05
pwr_chisquare[1].power = 0.05000612192891004
pwr_chisquare[1].method = 'Chi squared power calculation'
pwr_chisquare[1].note = 'N is the number of observations'
pwr_chisquare[2].w = 0.1
pwr_chisquare[2].N = 5
pwr_chisquare[2].df = 4
pwr_chisquare[2].sig_level = 0.05
pwr_chisquare[2].power = 0.05246644635810126
pwr_chisquare[2].method = 'Chi squared power calculation'
pwr_chisquare[2].note = 'N is the number of observations'
pwr_chisquare[3].w = 1
pwr_chisquare[3].N = 5
pwr_chisquare[3].df = 4
pwr_chisquare[3].sig_level = 0.05
pwr_chisquare[3].power = 0.396188517504065
pwr_chisquare[3].method = 'Chi squared power calculation'
pwr_chisquare[3].note = 'N is the number of observations'
pwr_chisquare[4].w = 1e-04
pwr_chisquare[4].N = 100
pwr_chisquare[4].df = 4
pwr_chisquare[4].sig_level = 0.05
pwr_chisquare[4].power = 0.05000004897454883
pwr_chisquare[4].method = 'Chi squared power calculation'
pwr_chisquare[4].note = 'N is the number of observations'
pwr_chisquare[5].w = 0.005
pwr_chisquare[5].N = 100
pwr_chisquare[5].df = 4
pwr_chisquare[5].sig_level = 0.05
pwr_chisquare[5].power = 0.05012248082672883
pwr_chisquare[5].method = 'Chi squared power calculation'
pwr_chisquare[5].note = 'N is the number of observations'
pwr_chisquare[6].w = 0.1
pwr_chisquare[6].N = 100
pwr_chisquare[6].df = 4
pwr_chisquare[6].sig_level = 0.05
pwr_chisquare[6].power = 0.1054845044462312
pwr_chisquare[6].method = 'Chi squared power calculation'
pwr_chisquare[6].note = 'N is the number of observations'
pwr_chisquare[7].w = 1
pwr_chisquare[7].N = 100
pwr_chisquare[7].df = 4
pwr_chisquare[7].sig_level = 0.05
pwr_chisquare[7].power = 0.999999999999644
pwr_chisquare[7].method = 'Chi squared power calculation'
pwr_chisquare[7].note = 'N is the number of observations'
pwr_chisquare[8].w = 1e-04
pwr_chisquare[8].N = 1000
pwr_chisquare[8].df = 4
pwr_chisquare[8].sig_level = 0.05
pwr_chisquare[8].power = 0.0500004897461283
pwr_chisquare[8].method = 'Chi squared power calculation'
pwr_chisquare[8].note = 'N is the number of observations'
pwr_chisquare[9].w = 0.005
pwr_chisquare[9].N = 1000
pwr_chisquare[9].df = 4
pwr_chisquare[9].sig_level = 0.05
pwr_chisquare[9].power = 0.0512288025485101
pwr_chisquare[9].method = 'Chi squared power calculation'
pwr_chisquare[9].note = 'N is the number of observations'
pwr_chisquare[10].w = 0.1
pwr_chisquare[10].N = 1000
pwr_chisquare[10].df = 4
pwr_chisquare[10].sig_level = 0.05
pwr_chisquare[10].power = 0.715986350467412
pwr_chisquare[10].method = 'Chi squared power calculation'
pwr_chisquare[10].note = 'N is the number of observations'
pwr_chisquare[11].w = 1
pwr_chisquare[11].N = 1000
pwr_chisquare[11].df = 4
pwr_chisquare[11].sig_level = 0.05
pwr_chisquare[11].power = 1
pwr_chisquare[11].method = 'Chi squared power calculation'
pwr_chisquare[11].note = 'N is the number of observations'
pwr_chisquare[12].w = 1e-04
pwr_chisquare[12].N = 30000
pwr_chisquare[12].df = 4
pwr_chisquare[12].sig_level = 0.05
pwr_chisquare[12].power = 0.05001469300301765
pwr_chisquare[12].method = 'Chi squared power calculation'
pwr_chisquare[12].note = 'N is the number of observations'
pwr_chisquare[13].w = 0.005
pwr_chisquare[13].N = 30000
pwr_chisquare[13].df = 4
pwr_chisquare[13].sig_level = 0.05
pwr_chisquare[13].power = 0.0904799545200348
pwr_chisquare[13].method = 'Chi squared power calculation'
pwr_chisquare[13].note = 'N is the number of observations'
pwr_chisquare[14].w = 0.1
pwr_chisquare[14].N = 30000
pwr_chisquare[14].df = 4
pwr_chisquare[14].sig_level = 0.05
pwr_chisquare[14].power = 1
pwr_chisquare[14].method = 'Chi squared power calculation'
pwr_chisquare[14].note = 'N is the number of observations'
pwr_chisquare[15].w = 1
pwr_chisquare[15].N = 30000
pwr_chisquare[15].df = 4
pwr_chisquare[15].sig_level = 0.05
pwr_chisquare[15].power = 1
pwr_chisquare[15].method = 'Chi squared power calculation'
pwr_chisquare[15].note = 'N is the number of observations'

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"""
Created on Fri Mar 01 14:48:59 2013
Author: Josef Perktold
"""
import collections
import numpy as np
from statsmodels.tools.testing import Holder
# numbers from R package `pwr` pwr.chisq.test
res_binom = collections.defaultdict(Holder)
res_binom_methods = ["agresti-coull", "asymptotic", "bayes", "cloglog",
"exact", "logit", "probit", "profile", "lrt", "prop.test",
"wilson"]
# > bci = binom.confint(x = c(18), n = 20, tol = 1e-8)
# > mkarray2(bci$lower, "res_binom[(18, 20)].ci_low")
res_binom[(18, 20)].ci_low = np.array([
0.6867561125596077, 0.768521618913513, 0.716146742695748,
0.656030707261567, 0.6830172859809176, 0.676197991611287,
0.7027685414174645, 0.722052946372325, 0.7220576251734515,
0.668722403162941, 0.6989663547715128
])
# > mkarray2(bci$upper, "res_binom[(18, 20)].ci_upp")
res_binom[(18, 20)].ci_upp = np.array([
0.984343760998137, 1.031478381086487, 0.97862751197755,
0.974010174395775, 0.9876514728297052, 0.974866415649319,
0.978858461808406, 0.982318186566456, 0.982639913376776,
0.982487361226571, 0.972133518786232
])
# >
# > bci = binom.confint(x = c(4), n = 20, tol = 1e-8)
# > mkarray2(bci$lower, "res_binom[(4, 20)].ci_low")
res_binom[(4, 20)].ci_low = np.array([
0.0749115102767071, 0.0246954918846837, 0.07152005247873425,
0.0623757232566298, 0.05733399705003284, 0.0771334546771001,
0.0710801045992076, 0.0668624655835687, 0.0668375191189685,
0.0661062308910436, 0.0806576625797981
])
# > mkarray2(bci$upper, "res_binom[(4, 20)].ci_upp")
res_binom[(4, 20)].ci_upp = np.array([
0.4217635845549845, 0.3753045081153163, 0.4082257625169254,
0.393143902056907, 0.436614002996668, 0.427846901518118,
0.4147088121599544, 0.405367872119342, 0.405364309586823,
0.442686245059445, 0.4160174322518935
])
# >
# > bci = binom.confint(x = c(4), n = 200, tol = 1e-8)
# > mkarray2(bci$lower, "res_binom[(4, 200)].ci_low")
res_binom[(4, 200)].ci_low = np.array([
0.005991954548218395, 0.000597346459104517, 0.00678759879519299,
0.006650668467968445, 0.005475565879556443, 0.00752663882411158,
0.00705442514086136, 0.00625387073493174, 0.00625223049303646,
0.00642601313670221, 0.00780442641634947
])
# > mkarray2(bci$upper, "res_binom[(4, 200)].ci_upp")
res_binom[(4, 200)].ci_upp = np.array([
0.0520995587739575, 0.0394026535408955, 0.0468465669668423,
0.04722535678688564, 0.05041360908989634, 0.05206026227201098,
0.04916362085874019, 0.04585048214247203, 0.0458490848884339,
0.0537574613520185, 0.05028708690582643
])
# > bci = binom.confint(x = c(190), n = 200, tol = 1e-8)
# Warning message:
# In binom.bayes(x, n, conf.level = conf.level, ...) :
# 1 confidence interval failed to converge (marked by '*').
# Try changing 'tol' to a different value.
# JP: I replace 0.02094150654714356 by np.nan in Bayes
# > mkarray2(bci$lower, "res_binom[(190, 200)].ci_low")
res_binom[(190, 200)].ci_low = np.array([
0.909307307911624, 0.919794926420966, np.nan,
0.909066091776046, 0.9099724622986486, 0.9095820742314172,
0.9118101288857796, 0.913954651984184, 0.913956305842353,
0.9073089225133698, 0.910421851861224
])
# > mkarray2(bci$upper, "res_binom[(190, 200)].ci_upp")
res_binom[(190, 200)].ci_upp = np.array([
0.973731898348837, 0.980205073579034, 1, 0.972780587302479,
0.975765834527891, 0.9728891271086528, 0.973671370402242,
0.974623779100809, 0.974626983311416, 0.974392083257476,
0.972617354399236
])
# > bci = binom.confint(x = c(1), n = 30, tol = 1e-8)
res_binom[(1, 30)].ci_low = np.array([
-8.305484e-03, -3.090070e-02, 6.903016e-05, 2.494567e-03,
8.435709e-04, 4.675346e-03, 3.475014e-03, 3.012987e-03,
1.932430e-03, 1.742467e-03, 5.908590e-03])
res_binom[(1, 30)].ci_upp = np.array([
0.18091798, 0.09756737, 0.12314380, 0.14513807,
0.17216946, 0.20200244, 0.16637241, 0.13868254,
0.13868375, 0.19053022, 0.16670391])
# > bci = binom.confint(x = c(29), n = 30, tol = 1e-8)
res_binom[(29, 30)].ci_low = np.array([
0.8190820, 0.9024326, 0.8768562, 0.7860836,
0.8278305, 0.7979976, 0.8336276, 0.8613175,
0.8613162, 0.8094698, 0.8332961])
res_binom[(29, 30)].ci_upp = np.array([
1.0083055, 1.0309007, 0.9999310, 0.9952363,
0.9991564, 0.9953247, 0.9965250, 0.9969870,
0.9980676, 0.9982575, 0.9940914])
# > bci = binom.confint(x = c(0), n = 30, tol = 1e-8)
# Note: this ci_low clips one negative value to 0
res_binom[(0, 30)].ci_low = np.zeros(11)
res_binom[(0, 30)].ci_upp = np.array([
0.13471170, 0.00000000, 0.06151672, 0.11570331,
0.11570331, 0.11570331, 0.11570331, 0.10402893,
0.06201781, 0.14132048, 0.11351339])
# > bci = binom.confint(x = c(30), n = 30, tol = 1e-8)
res_binom[(30, 30)].ci_low = np.array([
0.8652883, 1.0000000, 0.9384833, 0.8842967,
0.8842967, 0.8842967, 0.8842967, 0.8959711,
0.9379822, 0.8586795, 0.8864866])
# Note: this ci_upp clips one value > 1
res_binom[(30, 30)].ci_upp = np.ones(11)

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@ -0,0 +1,47 @@
"""
Created on Mon May 4 21:21:09 2020
Author: Josef Perktold
License: BSD-3
"""
import numpy as np
from statsmodels.tools.testing import Holder
NA = np.nan
# > pe = poisson.exact(c(60, 30), c(51477.5, 54308.7), tsmethod="minlike",
# midp=FALSE)
# > cat_items(pe, prefix="res.")
res_pexact_cond = res = Holder()
res.statistic = 60
res.parameter = 43.7956463130352
res.p_value = 0.000675182658686321
res.conf_int = np.array([
1.34983090611567, 3.27764509862914
])
res.estimate = 2.10999757175465
res.null_value = 1
res.alternative = 'two.sided'
res.method = ('Exact two-sided Poisson test (sum of minimum likelihood'
' method)')
res.data_name = 'c(60, 30) time base: c(51477.5, 54308.7)'
# > pe = poisson.exact(c(60, 30), c(51477.5, 54308.7), tsmethod="minlike",
# midp=TRUE)
# > cat_items(pe, prefix="res.")
res_pexact_cond_midp = res = Holder()
res.statistic = 60
res.parameter = 43.7956463130352
res.p_value = 0.000557262406619052
res.conf_int = np.array([
NA, NA
])
res.estimate = 2.10999757175465
res.null_value = 1
res.alternative = 'two.sided'
res.method = ('Exact two-sided Poisson test (sum of minimum'
' likelihood method), mid-p version')
res.data_name = 'c(60, 30) time base: c(51477.5, 54308.7)'

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@ -0,0 +1,36 @@
IV1,IV2,DV
-0.02015,-8.12,-0.00262
-0.09145,22.6,0.06002
-0.23417,34.14,0.28942
-0.11179,-24.21,-0.01991
0.16144,-14.37,-0.11282
0.15733,-10.98,-0.15465
0.05293,-0.61,-0.09055
0.05686,-3.38,-0.01311
-0.11524,18.48,0.01793
0.10973,-12.93,-0.02117
0.11152,-9.32,-0.08318
0.05917,5.86,-0.01982
-0.00468,-6.67,0.03378
-0.15653,25.27,0.10565
0.115,-2.55,0.0483
0.12352,-22.48,-0.07733
-0.03604,3.69,0.07183
0.05634,-6.19,-0.05512
-0.00401,2.25,0.01318
0.10524,-3.73,-0.00379
0.02288,1.5,0.00922
0.05646,-3.48,-0.02355
0.09566,3.33,-0.06103
0.01535,1.1,-0.0343
0.0435,-4.41,-0.02346
-0.00534,0,-0.05993
0.04721,9.22,-0.00264
0.01321,-3.86,-0.02038
-0.00353,-3.54,-0.00693
-0.07728,21.89,0.04091
0.0572,-16.35,0.00791
0.00372,3.75,0.10267
0.02087,-2.38,-0.04426
0.03918,-7.62,-0.05083
0.03597,4.37,0.01428
1 IV1 IV2 DV
2 -0.02015 -8.12 -0.00262
3 -0.09145 22.6 0.06002
4 -0.23417 34.14 0.28942
5 -0.11179 -24.21 -0.01991
6 0.16144 -14.37 -0.11282
7 0.15733 -10.98 -0.15465
8 0.05293 -0.61 -0.09055
9 0.05686 -3.38 -0.01311
10 -0.11524 18.48 0.01793
11 0.10973 -12.93 -0.02117
12 0.11152 -9.32 -0.08318
13 0.05917 5.86 -0.01982
14 -0.00468 -6.67 0.03378
15 -0.15653 25.27 0.10565
16 0.115 -2.55 0.0483
17 0.12352 -22.48 -0.07733
18 -0.03604 3.69 0.07183
19 0.05634 -6.19 -0.05512
20 -0.00401 2.25 0.01318
21 0.10524 -3.73 -0.00379
22 0.02288 1.5 0.00922
23 0.05646 -3.48 -0.02355
24 0.09566 3.33 -0.06103
25 0.01535 1.1 -0.0343
26 0.0435 -4.41 -0.02346
27 -0.00534 0 -0.05993
28 0.04721 9.22 -0.00264
29 0.01321 -3.86 -0.02038
30 -0.00353 -3.54 -0.00693
31 -0.07728 21.89 0.04091
32 0.0572 -16.35 0.00791
33 0.00372 3.75 0.10267
34 0.02087 -2.38 -0.04426
35 0.03918 -7.62 -0.05083
36 0.03597 4.37 0.01428

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@ -0,0 +1,36 @@
IV1,IV2,IV3,DV
144.6,0.02846,2.28,-0.00262
30,0.15082,2.768,0.06002
-293.1,0.58902,3.323,0.28942
-166,0.01642,-5.012,-0.01991
-43.5,-0.23772,-1.471,-0.11282
43.7,-0.42052,1.129,-0.15465
182.4,-0.2129,1.837,-0.09055
114.6,-0.22211,1.686,-0.01311
207.5,0.02502,0.344,0.01793
169.1,0.10521,-0.077,-0.02117
172.5,-0.07982,0.637,-0.08318
8.2,-0.08353,1.765,-0.01982
222.5,-0.02544,2.345,0.03378
126.2,0.28108,2.524,0.10565
198.2,0.18466,1.465,0.0483
188.6,-0.09714,1.014,-0.07733
148,0.01393,1.279,0.07183
106,-0.04318,0.482,-0.05512
69.4,-0.14695,1.033,0.01318
178.1,-0.07366,1.528,-0.00379
66,0.02879,0.93,0.00922
207.9,0.01782,-0.271,-0.02355
250.6,-0.06627,1.253,-0.06103
31.4,-0.114,0.906,-0.0343
289.6,-0.08656,1.491,-0.02346
301.4,0.01026,1.099,-0.05993
113.6,0.12251,0.612,-0.00264
138.8,0.05026,-0.418,-0.02038
218.5,0,-1.507,-0.00693
134.5,0.12344,1.373,0.04091
59.5,0.05136,0.881,0.00791
38,0.10883,0.212,0.10267
212.8,-0.12725,0.067,-0.04426
191.1,-0.09324,1.374,-0.05083
176.4,-0.09707,1.06,0.01428
1 IV1 IV2 IV3 DV
2 144.6 0.02846 2.28 -0.00262
3 30 0.15082 2.768 0.06002
4 -293.1 0.58902 3.323 0.28942
5 -166 0.01642 -5.012 -0.01991
6 -43.5 -0.23772 -1.471 -0.11282
7 43.7 -0.42052 1.129 -0.15465
8 182.4 -0.2129 1.837 -0.09055
9 114.6 -0.22211 1.686 -0.01311
10 207.5 0.02502 0.344 0.01793
11 169.1 0.10521 -0.077 -0.02117
12 172.5 -0.07982 0.637 -0.08318
13 8.2 -0.08353 1.765 -0.01982
14 222.5 -0.02544 2.345 0.03378
15 126.2 0.28108 2.524 0.10565
16 198.2 0.18466 1.465 0.0483
17 188.6 -0.09714 1.014 -0.07733
18 148 0.01393 1.279 0.07183
19 106 -0.04318 0.482 -0.05512
20 69.4 -0.14695 1.033 0.01318
21 178.1 -0.07366 1.528 -0.00379
22 66 0.02879 0.93 0.00922
23 207.9 0.01782 -0.271 -0.02355
24 250.6 -0.06627 1.253 -0.06103
25 31.4 -0.114 0.906 -0.0343
26 289.6 -0.08656 1.491 -0.02346
27 301.4 0.01026 1.099 -0.05993
28 113.6 0.12251 0.612 -0.00264
29 138.8 0.05026 -0.418 -0.02038
30 218.5 0 -1.507 -0.00693
31 134.5 0.12344 1.373 0.04091
32 59.5 0.05136 0.881 0.00791
33 38 0.10883 0.212 0.10267
34 212.8 -0.12725 0.067 -0.04426
35 191.1 -0.09324 1.374 -0.05083
36 176.4 -0.09707 1.06 0.01428

View File

@ -0,0 +1,36 @@
IV1,IV2,DUM1,DUM2,DV
-0.02015,7.6,0,0,0.01291
-0.09145,44.1,0,0,-0.04267
-0.23417,252.7,0,0,-0.25406
-0.11179,9.4,1,0,0.34175
0.16144,-122.1,0,0,0.10051
0.15733,-156.2,0,0,0.13155
0.05293,-57.3,0,0,0.09492
0.05686,-48.1,0,0,0.03839
-0.11524,4.9,0,0,0.0188
0.10973,22,0,0,0.01934
0.11152,-16.9,0,0,0.10318
0.05917,-16.3,0,0,0.06143
-0.00468,-4.7,0,0,0.00608
-0.15653,59.2,0,0,-0.00281
0.115,49,0,0,0.01905
0.12352,-26.9,0,0,0.06962
-0.03604,3.7,0,1,0.21069
0.05634,-11.3,0,0,0.06319
-0.00401,-35,0,0,0.03645
0.10524,-15.7,0,0,0.0444
0.02288,6,0,0,0.02033
0.05646,3.8,0,0,0.06044
0.09566,-13.8,0,0,0.06762
0.01535,-21.7,0,0,0.03301
0.0435,-14.9,0,0,0.01857
-0.00534,1.7,0,0,0.06799
0.04721,21.7,0,0,0.01813
0.01321,9.7,0,0,0.02022
-0.00353,0,0,0,0.01317
-0.07728,26,0,0,-0.00628
0.0572,11.8,0,0,0.02035
0.00372,27.1,0,0,-0.04564
0.02087,-31.4,0,0,0.04537
0.03918,-20.6,0,0,0.07685
0.03597,-19.5,0,0,0.03299
1 IV1 IV2 DUM1 DUM2 DV
2 -0.02015 7.6 0 0 0.01291
3 -0.09145 44.1 0 0 -0.04267
4 -0.23417 252.7 0 0 -0.25406
5 -0.11179 9.4 1 0 0.34175
6 0.16144 -122.1 0 0 0.10051
7 0.15733 -156.2 0 0 0.13155
8 0.05293 -57.3 0 0 0.09492
9 0.05686 -48.1 0 0 0.03839
10 -0.11524 4.9 0 0 0.0188
11 0.10973 22 0 0 0.01934
12 0.11152 -16.9 0 0 0.10318
13 0.05917 -16.3 0 0 0.06143
14 -0.00468 -4.7 0 0 0.00608
15 -0.15653 59.2 0 0 -0.00281
16 0.115 49 0 0 0.01905
17 0.12352 -26.9 0 0 0.06962
18 -0.03604 3.7 0 1 0.21069
19 0.05634 -11.3 0 0 0.06319
20 -0.00401 -35 0 0 0.03645
21 0.10524 -15.7 0 0 0.0444
22 0.02288 6 0 0 0.02033
23 0.05646 3.8 0 0 0.06044
24 0.09566 -13.8 0 0 0.06762
25 0.01535 -21.7 0 0 0.03301
26 0.0435 -14.9 0 0 0.01857
27 -0.00534 1.7 0 0 0.06799
28 0.04721 21.7 0 0 0.01813
29 0.01321 9.7 0 0 0.02022
30 -0.00353 0 0 0 0.01317
31 -0.07728 26 0 0 -0.00628
32 0.0572 11.8 0 0 0.02035
33 0.00372 27.1 0 0 -0.04564
34 0.02087 -31.4 0 0 0.04537
35 0.03918 -20.6 0 0 0.07685
36 0.03597 -19.5 0 0 0.03299

View File

@ -0,0 +1,36 @@
IV1,IV2,IV3,DUM1,DUM2,DV
144.6,-0.02036,0.03699,0,0,0.01291
30,-0.09591,-0.25186,0,0,-0.04267
-293.1,-0.2668,0.93698,0,0,-0.25406
-166,-0.11855,0.73074,1,0,0.34175
-43.5,0.14966,-0.29941,0,0,0.10051
43.7,0.14612,-0.25366,0,0,0.13155
182.4,0.05158,-0.2597,0,0,0.09492
114.6,0.0553,-0.01949,0,0,0.03839
207.5,-0.12244,-0.11013,0,0,0.0188
169.1,0.10412,0.67668,0,0,0.01934
172.5,0.10573,-0.28238,0,0,0.10318
8.2,0.05749,-0.28363,0,0,0.06143
222.5,-0.00469,0.24894,0,0,0.00608
126.2,-0.17023,-0.22687,0,0,-0.00281
198.2,0.10886,1.11175,0,0,0.01905
188.6,0.11647,-0.05312,0,0,0.06962
148,-0.03671,-0.49461,0,1,0.21069
106,0.05481,0.16064,0,0,0.06319
69.4,-0.00402,-0.23218,0,0,0.03645
178.1,0.10007,0.10992,0,0,0.0444
66,0.02262,-0.16417,0,0,0.02033
207.9,0.05493,0.07899,0,0,0.06044
250.6,0.09136,-0.16984,0,0,0.06762
31.4,0.01524,0.19577,0,0,0.03301
289.6,0.04258,0.05408,0,0,0.01857
301.4,-0.00535,-0.20569,0,0,0.06799
113.6,0.04613,0,0,0,0.01813
138.8,0.01312,0.5414,0,0,0.02022
218.5,-0.00354,-0.14705,0,0,0.01317
134.5,-0.08043,-0.15811,0,0,-0.00628
59.5,0.05562,1.16127,0,0,0.02035
38,0.00371,-0.40133,0,0,-0.04564
212.8,0.02066,0.15375,0,0,0.04537
191.1,0.03843,-0.08458,0,0,0.07685
176.4,0.03534,-0.29581,0,0,0.03299
1 IV1 IV2 IV3 DUM1 DUM2 DV
2 144.6 -0.02036 0.03699 0 0 0.01291
3 30 -0.09591 -0.25186 0 0 -0.04267
4 -293.1 -0.2668 0.93698 0 0 -0.25406
5 -166 -0.11855 0.73074 1 0 0.34175
6 -43.5 0.14966 -0.29941 0 0 0.10051
7 43.7 0.14612 -0.25366 0 0 0.13155
8 182.4 0.05158 -0.2597 0 0 0.09492
9 114.6 0.0553 -0.01949 0 0 0.03839
10 207.5 -0.12244 -0.11013 0 0 0.0188
11 169.1 0.10412 0.67668 0 0 0.01934
12 172.5 0.10573 -0.28238 0 0 0.10318
13 8.2 0.05749 -0.28363 0 0 0.06143
14 222.5 -0.00469 0.24894 0 0 0.00608
15 126.2 -0.17023 -0.22687 0 0 -0.00281
16 198.2 0.10886 1.11175 0 0 0.01905
17 188.6 0.11647 -0.05312 0 0 0.06962
18 148 -0.03671 -0.49461 0 1 0.21069
19 106 0.05481 0.16064 0 0 0.06319
20 69.4 -0.00402 -0.23218 0 0 0.03645
21 178.1 0.10007 0.10992 0 0 0.0444
22 66 0.02262 -0.16417 0 0 0.02033
23 207.9 0.05493 0.07899 0 0 0.06044
24 250.6 0.09136 -0.16984 0 0 0.06762
25 31.4 0.01524 0.19577 0 0 0.03301
26 289.6 0.04258 0.05408 0 0 0.01857
27 301.4 -0.00535 -0.20569 0 0 0.06799
28 113.6 0.04613 0 0 0 0.01813
29 138.8 0.01312 0.5414 0 0 0.02022
30 218.5 -0.00354 -0.14705 0 0 0.01317
31 134.5 -0.08043 -0.15811 0 0 -0.00628
32 59.5 0.05562 1.16127 0 0 0.02035
33 38 0.00371 -0.40133 0 0 -0.04564
34 212.8 0.02066 0.15375 0 0 0.04537
35 191.1 0.03843 -0.08458 0 0 0.07685
36 176.4 0.03534 -0.29581 0 0 0.03299